Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Gm12887B1AVM1 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Gm12887B1AVM1 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Gm12887B1AVM1 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Gm12887B1AVM1 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Gm12887B1AVM1 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Gm12887B1AVM1 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Gm12887B1AVM1 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Gm12887B1AVM1 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Gm12887B1AVM1 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Gm12887B1AVM1 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Gm12887B1AVM1 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Gm12887B1AVM1 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Gm12887B1AVM1 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Gm12887B1AVM1 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Gm12887B1AVM1 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Gm12887B1AVM1 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Gm12887B1AVM1 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Gm12887B1AVM1 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Gm12887B1AVM1 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Gm12887B1AVM1 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
Gm12887B1AVM1 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Gm12887B1AVM1 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Gm12887B1AVM1 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Gm12887B1AVM1 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Gm12887B1AVM1 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Gm12887B1AVM1 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC12.24□□□□□ -0.45
Gm12887B1AVM1 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
Gm12887B1AVM1 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Gm12887B1AVM1 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC12.24□□□□□ -0.45
Gm12887B1AVM1 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Gm12887B1AVM1 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Gm12887B1AVM1 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC12.24□□□□□ -0.45
Gm12887B1AVM1 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
Gm12887B1AVM1 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Gm12887B1AVM1 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Gm12887B1AVM1 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Gm12887B1AVM1 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Gm12887B1AVM1 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Gm12887B1AVM1 Gm9987-201ENSMUST00000069768 567 ntBASIC12.24□□□□□ -0.45
Gm12887B1AVM1 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Gm12887B1AVM1 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Gm12887B1AVM1 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Gm12887B1AVM1 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC12.24□□□□□ -0.45
Gm12887B1AVM1 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Gm12887B1AVM1 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Gm12887B1AVM1 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Gm12887B1AVM1 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Gm12887B1AVM1 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Gm12887B1AVM1 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC12.23□□□□□ -0.45
Gm12887B1AVM1 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Gm12887B1AVM1 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC12.23□□□□□ -0.45
Gm12887B1AVM1 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Gm12887B1AVM1 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Gm12887B1AVM1 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Gm12887B1AVM1 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Gm12887B1AVM1 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Gm12887B1AVM1 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Gm12887B1AVM1 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Gm12887B1AVM1 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Gm12887B1AVM1 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Gm12887B1AVM1 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Gm12887B1AVM1 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Gm12887B1AVM1 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Gm12887B1AVM1 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC12.23□□□□□ -0.45
Gm12887B1AVM1 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC12.23□□□□□ -0.45
Gm12887B1AVM1 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Gm12887B1AVM1 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC12.23□□□□□ -0.45
Gm12887B1AVM1 AC160980.1-201ENSMUST00000224136 970 ntBASIC12.23□□□□□ -0.45
Gm12887B1AVM1 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Gm12887B1AVM1 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Gm12887B1AVM1 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Gm12887B1AVM1 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Gm12887B1AVM1 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC12.23□□□□□ -0.45
Gm12887B1AVM1 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Gm12887B1AVM1 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Gm12887B1AVM1 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC12.23□□□□□ -0.45
Gm12887B1AVM1 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Gm12887B1AVM1 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Gm12887B1AVM1 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC12.23□□□□□ -0.45
Gm12887B1AVM1 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Gm12887B1AVM1 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Gm12887B1AVM1 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC12.23□□□□□ -0.45
Gm12887B1AVM1 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Gm12887B1AVM1 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC12.23□□□□□ -0.45
Gm12887B1AVM1 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Gm12887B1AVM1 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Gm12887B1AVM1 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Gm12887B1AVM1 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Gm12887B1AVM1 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Gm12887B1AVM1 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Gm12887B1AVM1 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Gm12887B1AVM1 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Gm12887B1AVM1 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Gm12887B1AVM1 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Gm12887B1AVM1 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Gm12887B1AVM1 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Gm12887B1AVM1 Gm8242-201ENSMUST00000193029 1420 ntBASIC12.22□□□□□ -0.45
Gm12887B1AVM1 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Gm12887B1AVM1 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 64.7 ms