Protein–RNA interactions for Protein: B1AR17

Chd3, Chromodomain helicase DNA-binding protein 3, mousemouse

Predictions only

Length 2,055 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3B1AR17 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Chd3B1AR17 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Chd3B1AR17 Gm7336-201ENSMUST00000107041 1232 ntBASIC14.77□□□□□ -0.04
Chd3B1AR17 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
Chd3B1AR17 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC14.77□□□□□ -0.04
Chd3B1AR17 Gm8597-201ENSMUST00000191525 1109 ntBASIC14.77□□□□□ -0.04
Chd3B1AR17 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.04
Chd3B1AR17 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC14.77□□□□□ -0.04
Chd3B1AR17 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Chd3B1AR17 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Chd3B1AR17 Celf4-206ENSMUST00000224553 1729 ntBASIC14.77□□□□□ -0.05
Chd3B1AR17 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Chd3B1AR17 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Chd3B1AR17 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Chd3B1AR17 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Chd3B1AR17 Gm11543-201ENSMUST00000120758 370 ntBASIC14.77□□□□□ -0.05
Chd3B1AR17 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Chd3B1AR17 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC14.77□□□□□ -0.05
Chd3B1AR17 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC14.77□□□□□ -0.05
Chd3B1AR17 AC164567.1-201ENSMUST00000219185 960 ntBASIC14.77□□□□□ -0.05
Chd3B1AR17 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Chd3B1AR17 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Chd3B1AR17 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Chd3B1AR17 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Chd3B1AR17 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Chd3B1AR17 Gm14026-201ENSMUST00000120625 1789 ntBASIC14.76□□□□□ -0.05
Chd3B1AR17 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Chd3B1AR17 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
Chd3B1AR17 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Chd3B1AR17 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Chd3B1AR17 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Chd3B1AR17 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Chd3B1AR17 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Chd3B1AR17 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Chd3B1AR17 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Chd3B1AR17 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Chd3B1AR17 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Chd3B1AR17 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Chd3B1AR17 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Chd3B1AR17 Gm13616-201ENSMUST00000120600 222 ntBASIC14.76□□□□□ -0.05
Chd3B1AR17 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC14.76□□□□□ -0.05
Chd3B1AR17 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Chd3B1AR17 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Chd3B1AR17 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC14.76□□□□□ -0.05
Chd3B1AR17 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Chd3B1AR17 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Chd3B1AR17 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Chd3B1AR17 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Chd3B1AR17 AC131743.5-201ENSMUST00000220775 1618 ntBASIC14.76□□□□□ -0.05
Chd3B1AR17 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Chd3B1AR17 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Chd3B1AR17 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Chd3B1AR17 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Chd3B1AR17 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Chd3B1AR17 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Chd3B1AR17 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Chd3B1AR17 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Chd3B1AR17 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Chd3B1AR17 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Chd3B1AR17 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC14.75□□□□□ -0.05
Chd3B1AR17 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Chd3B1AR17 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC14.75□□□□□ -0.05
Chd3B1AR17 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Chd3B1AR17 Gm44872-201ENSMUST00000207864 420 ntBASIC14.75□□□□□ -0.05
Chd3B1AR17 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Chd3B1AR17 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC14.75□□□□□ -0.05
Chd3B1AR17 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Chd3B1AR17 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC14.75□□□□□ -0.05
Chd3B1AR17 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Chd3B1AR17 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Chd3B1AR17 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Chd3B1AR17 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Chd3B1AR17 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Chd3B1AR17 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Chd3B1AR17 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC14.75□□□□□ -0.05
Chd3B1AR17 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Chd3B1AR17 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC14.75□□□□□ -0.05
Chd3B1AR17 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC14.75□□□□□ -0.05
Chd3B1AR17 Gm5479-201ENSMUST00000160578 435 ntBASIC14.75□□□□□ -0.05
Chd3B1AR17 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC14.75□□□□□ -0.05
Chd3B1AR17 Gm38294-201ENSMUST00000192831 381 ntBASIC14.75□□□□□ -0.05
Chd3B1AR17 AC124732.2-201ENSMUST00000221977 316 ntBASIC14.75□□□□□ -0.05
Chd3B1AR17 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Chd3B1AR17 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Chd3B1AR17 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Chd3B1AR17 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Chd3B1AR17 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Chd3B1AR17 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
Chd3B1AR17 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Chd3B1AR17 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Chd3B1AR17 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
Chd3B1AR17 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Chd3B1AR17 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Chd3B1AR17 Gm29340-201ENSMUST00000188763 3854 ntBASIC14.74□□□□□ -0.05
Chd3B1AR17 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Chd3B1AR17 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Chd3B1AR17 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Chd3B1AR17 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Chd3B1AR17 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Chd3B1AR17 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms