Protein–RNA interactions for Protein: A4IF42

Gm4559, ENSMUSG00000056885 protein (Fragment), mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm4559A4IF42 Tgm5-201ENSMUST00000028721 2613 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Gm4559A4IF42 Gm26700-201ENSMUST00000181480 1957 ntTSL 5 BASIC3.16□□□□□ -1.9
Gm4559A4IF42 Gm17308-201ENSMUST00000181749 1997 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
Gm4559A4IF42 B020004C17Rik-201ENSMUST00000178161 2385 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Gm4559A4IF42 Ehf-202ENSMUST00000111174 1307 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Gm4559A4IF42 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Gm4559A4IF42 Olfr1140-203ENSMUST00000217572 1327 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Gm4559A4IF42 Zfp995-201ENSMUST00000106026 1744 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Gm4559A4IF42 Cep70-209ENSMUST00000191335 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
Gm4559A4IF42 D430013B06Rik-201ENSMUST00000192922 1872 ntBASIC3.16□□□□□ -1.9
Gm4559A4IF42 Xlr5a-203ENSMUST00000114521 1474 ntTSL 5 BASIC3.16□□□□□ -1.9
Gm4559A4IF42 BC085271-201ENSMUST00000191852 1487 ntBASIC3.16□□□□□ -1.9
Gm4559A4IF42 Abcc9-205ENSMUST00000204870 1458 ntTSL 2 BASIC3.16□□□□□ -1.9
Gm4559A4IF42 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Gm4559A4IF42 AC151904.1-201ENSMUST00000219945 1498 ntBASIC3.16□□□□□ -1.9
Gm4559A4IF42 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
Gm4559A4IF42 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.9
Gm4559A4IF42 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
Gm4559A4IF42 AC153729.1-201ENSMUST00000214055 2562 ntBASIC3.15□□□□□ -1.9
Gm4559A4IF42 Gm43880-201ENSMUST00000203635 2162 ntBASIC3.15□□□□□ -1.9
Gm4559A4IF42 AC154355.1-201ENSMUST00000224604 2162 ntBASIC3.15□□□□□ -1.9
Gm4559A4IF42 Slc16a4-202ENSMUST00000106723 1781 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.9
Gm4559A4IF42 Gm36962-201ENSMUST00000192114 1761 ntBASIC3.15□□□□□ -1.9
Gm4559A4IF42 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
Gm4559A4IF42 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
Gm4559A4IF42 Hmgn3-203ENSMUST00000185315 1391 ntAPPRIS ALT2 TSL 2 BASIC3.15□□□□□ -1.9
Gm4559A4IF42 Gm37772-201ENSMUST00000191635 1394 ntBASIC3.15□□□□□ -1.9
Gm4559A4IF42 Vmn1r41-201ENSMUST00000204949 1378 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.9
Gm4559A4IF42 Gm42397-206ENSMUST00000208808 1358 ntTSL 5 BASIC3.15□□□□□ -1.9
Gm4559A4IF42 D030045P18Rik-203ENSMUST00000214947 1938 ntTSL 5 BASIC3.15□□□□□ -1.9
Gm4559A4IF42 Phf11a-201ENSMUST00000062307 1354 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
Gm4559A4IF42 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
Gm4559A4IF42 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
Gm4559A4IF42 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
Gm4559A4IF42 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
Gm4559A4IF42 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
Gm4559A4IF42 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
Gm4559A4IF42 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
Gm4559A4IF42 Tank-204ENSMUST00000112501 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.9
Gm4559A4IF42 Omg-201ENSMUST00000164465 2228 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
Gm4559A4IF42 Zfp353-ps-201ENSMUST00000107130 1650 ntBASIC3.15□□□□□ -1.9
Gm4559A4IF42 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
Gm4559A4IF42 Gm30346-201ENSMUST00000218641 1699 ntBASIC3.15□□□□□ -1.9
Gm4559A4IF42 Kcne2-201ENSMUST00000047383 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
Gm4559A4IF42 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
Gm4559A4IF42 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
Gm4559A4IF42 Btbd35f5-201ENSMUST00000179538 1950 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Gm4559A4IF42 Trbv2-201ENSMUST00000103263 560 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Gm4559A4IF42 Trgv2-201ENSMUST00000103563 491 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Gm4559A4IF42 Olfr616-201ENSMUST00000106886 954 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Gm4559A4IF42 Focad-202ENSMUST00000107147 1177 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
Gm4559A4IF42 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Gm4559A4IF42 Gmfg-203ENSMUST00000108292 657 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Gm4559A4IF42 Gm14419-201ENSMUST00000108975 683 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
Gm4559A4IF42 Gm14399-205ENSMUST00000109062 626 ntTSL 5 BASIC3.15□□□□□ -1.91
Gm4559A4IF42 Sub1-202ENSMUST00000110504 675 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
Gm4559A4IF42 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.91
Gm4559A4IF42 Gm14239-201ENSMUST00000116491 685 ntBASIC3.15□□□□□ -1.91
Gm4559A4IF42 Gm23988-201ENSMUST00000117034 122 ntBASIC3.15□□□□□ -1.91
Gm4559A4IF42 Gm14755-201ENSMUST00000118037 384 ntBASIC3.15□□□□□ -1.91
Gm4559A4IF42 Gm14923-201ENSMUST00000118270 155 ntBASIC3.15□□□□□ -1.91
Gm4559A4IF42 Gm15923-201ENSMUST00000119300 1169 ntBASIC3.15□□□□□ -1.91
Gm4559A4IF42 Gm15968-201ENSMUST00000119342 1168 ntBASIC3.15□□□□□ -1.91
Gm4559A4IF42 Gm5909-201ENSMUST00000119768 1281 ntBASIC3.15□□□□□ -1.91
Gm4559A4IF42 Gm13751-201ENSMUST00000120280 752 ntBASIC3.15□□□□□ -1.91
Gm4559A4IF42 Gm12880-201ENSMUST00000120652 494 ntBASIC3.15□□□□□ -1.91
Gm4559A4IF42 Gm14919-201ENSMUST00000120839 390 ntBASIC3.15□□□□□ -1.91
Gm4559A4IF42 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
Gm4559A4IF42 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Gm4559A4IF42 Gm13024-201ENSMUST00000121756 718 ntBASIC3.15□□□□□ -1.91
Gm4559A4IF42 Scgb2b25-ps-201ENSMUST00000121936 307 ntBASIC3.15□□□□□ -1.91
Gm4559A4IF42 Gm15376-201ENSMUST00000122258 783 ntBASIC3.15□□□□□ -1.91
Gm4559A4IF42 Gm26424-201ENSMUST00000122530 104 ntBASIC3.15□□□□□ -1.91
Gm4559A4IF42 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
Gm4559A4IF42 Gm5834-201ENSMUST00000126680 1026 ntBASIC3.15□□□□□ -1.91
Gm4559A4IF42 Gm14978-201ENSMUST00000129000 304 ntTSL 3 BASIC3.15□□□□□ -1.91
Gm4559A4IF42 D630024D03Rik-203ENSMUST00000134944 715 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
Gm4559A4IF42 1700061H18Rik-201ENSMUST00000139488 634 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
Gm4559A4IF42 8030443G20Rik-201ENSMUST00000140919 903 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
Gm4559A4IF42 1700061H18Rik-202ENSMUST00000147221 564 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
Gm4559A4IF42 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC3.15□□□□□ -1.91
Gm4559A4IF42 Crem-236ENSMUST00000154715 1167 ntTSL 5 BASIC3.15□□□□□ -1.91
Gm4559A4IF42 Scarna2-201ENSMUST00000157560 414 ntBASIC3.15□□□□□ -1.91
Gm4559A4IF42 Gm26173-201ENSMUST00000158416 136 ntBASIC3.15□□□□□ -1.91
Gm4559A4IF42 Gm26402-201ENSMUST00000158499 113 ntBASIC3.15□□□□□ -1.91
Gm4559A4IF42 Gm25413-201ENSMUST00000158544 312 ntBASIC3.15□□□□□ -1.91
Gm4559A4IF42 Gm25362-201ENSMUST00000158854 105 ntBASIC3.15□□□□□ -1.91
Gm4559A4IF42 Phf11d-203ENSMUST00000161031 1130 ntAPPRIS ALT2 TSL 2 BASIC3.15□□□□□ -1.91
Gm4559A4IF42 Eif3s6-ps2-201ENSMUST00000163304 219 ntBASIC3.15□□□□□ -1.91
Gm4559A4IF42 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
Gm4559A4IF42 Ankrd55-204ENSMUST00000168684 1005 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
Gm4559A4IF42 7420461P10Rik-201ENSMUST00000169439 781 ntAPPRIS P2 TSL 1 (best) BASIC3.15□□□□□ -1.91
Gm4559A4IF42 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
Gm4559A4IF42 Gm18560-201ENSMUST00000173463 1123 ntBASIC3.15□□□□□ -1.91
Gm4559A4IF42 Vmn2r-ps85-201ENSMUST00000174022 940 ntBASIC3.15□□□□□ -1.91
Gm4559A4IF42 Olfr126-201ENSMUST00000174139 960 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Gm4559A4IF42 Mir5128-201ENSMUST00000175217 84 ntBASIC3.15□□□□□ -1.91
Gm4559A4IF42 Vmn2r-ps121-201ENSMUST00000176230 802 ntBASIC3.15□□□□□ -1.91
Gm4559A4IF42 Vmn1r-ps148-201ENSMUST00000176775 455 ntBASIC3.15□□□□□ -1.91
Gm4559A4IF42 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms