Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Chd6A3KFM7 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Chd6A3KFM7 Gm8652-201ENSMUST00000181363 964 ntBASIC12.15□□□□□ -0.47
Chd6A3KFM7 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC12.15□□□□□ -0.47
Chd6A3KFM7 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC12.15□□□□□ -0.47
Chd6A3KFM7 Gm16476-201ENSMUST00000221544 139 ntBASIC12.15□□□□□ -0.47
Chd6A3KFM7 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Chd6A3KFM7 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Chd6A3KFM7 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Chd6A3KFM7 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Chd6A3KFM7 Gm9816-201ENSMUST00000122292 1414 ntBASIC12.14□□□□□ -0.47
Chd6A3KFM7 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Chd6A3KFM7 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Chd6A3KFM7 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Chd6A3KFM7 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Chd6A3KFM7 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Chd6A3KFM7 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Chd6A3KFM7 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Chd6A3KFM7 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Chd6A3KFM7 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Chd6A3KFM7 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Chd6A3KFM7 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Chd6A3KFM7 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Chd6A3KFM7 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC12.14□□□□□ -0.47
Chd6A3KFM7 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Chd6A3KFM7 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Chd6A3KFM7 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Chd6A3KFM7 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Chd6A3KFM7 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Chd6A3KFM7 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC12.14□□□□□ -0.47
Chd6A3KFM7 Gm2495-201ENSMUST00000191160 466 ntBASIC12.14□□□□□ -0.47
Chd6A3KFM7 Snhg8-201ENSMUST00000196466 448 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Chd6A3KFM7 Klk2-ps-201ENSMUST00000205342 571 ntBASIC12.14□□□□□ -0.47
Chd6A3KFM7 Gm6091-201ENSMUST00000098307 165 ntBASIC12.14□□□□□ -0.47
Chd6A3KFM7 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Chd6A3KFM7 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Chd6A3KFM7 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Chd6A3KFM7 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC12.14□□□□□ -0.47
Chd6A3KFM7 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC12.14□□□□□ -0.47
Chd6A3KFM7 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Chd6A3KFM7 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC12.14□□□□□ -0.47
Chd6A3KFM7 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Chd6A3KFM7 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Chd6A3KFM7 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Chd6A3KFM7 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Chd6A3KFM7 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Chd6A3KFM7 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC12.13□□□□□ -0.47
Chd6A3KFM7 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC12.13□□□□□ -0.47
Chd6A3KFM7 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Chd6A3KFM7 Gm6756-201ENSMUST00000180647 1620 ntBASIC12.13□□□□□ -0.47
Chd6A3KFM7 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC12.13□□□□□ -0.47
Chd6A3KFM7 Proscos-202ENSMUST00000178990 666 ntBASIC12.13□□□□□ -0.47
Chd6A3KFM7 Gm29649-201ENSMUST00000185649 419 ntBASIC12.13□□□□□ -0.47
Chd6A3KFM7 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Chd6A3KFM7 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC12.13□□□□□ -0.47
Chd6A3KFM7 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Chd6A3KFM7 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Chd6A3KFM7 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Chd6A3KFM7 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Chd6A3KFM7 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Chd6A3KFM7 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Chd6A3KFM7 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Chd6A3KFM7 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Chd6A3KFM7 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC12.13□□□□□ -0.47
Chd6A3KFM7 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC12.13□□□□□ -0.47
Chd6A3KFM7 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Chd6A3KFM7 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Chd6A3KFM7 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Chd6A3KFM7 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Chd6A3KFM7 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Chd6A3KFM7 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC12.13□□□□□ -0.47
Chd6A3KFM7 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Chd6A3KFM7 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
Chd6A3KFM7 Gm27514-201ENSMUST00000183692 110 ntBASIC12.13□□□□□ -0.47
Chd6A3KFM7 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC12.13□□□□□ -0.47
Chd6A3KFM7 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC12.13□□□□□ -0.47
Chd6A3KFM7 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Chd6A3KFM7 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Chd6A3KFM7 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Chd6A3KFM7 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Chd6A3KFM7 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Chd6A3KFM7 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Chd6A3KFM7 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Chd6A3KFM7 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Chd6A3KFM7 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Chd6A3KFM7 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Chd6A3KFM7 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Chd6A3KFM7 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Chd6A3KFM7 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Chd6A3KFM7 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Chd6A3KFM7 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Chd6A3KFM7 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Chd6A3KFM7 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC12.12□□□□□ -0.47
Chd6A3KFM7 Gm14722-201ENSMUST00000118943 689 ntBASIC12.12□□□□□ -0.47
Chd6A3KFM7 Selenot-ps-201ENSMUST00000119098 593 ntBASIC12.12□□□□□ -0.47
Chd6A3KFM7 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Chd6A3KFM7 Gm7446-201ENSMUST00000221035 1240 ntBASIC12.12□□□□□ -0.47
Chd6A3KFM7 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Chd6A3KFM7 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Chd6A3KFM7 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 57 ms