Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC12.75□□□□□ -0.37
Col6a4A2AX52 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col6a4A2AX52 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Col6a4A2AX52 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col6a4A2AX52 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col6a4A2AX52 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col6a4A2AX52 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col6a4A2AX52 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC12.75□□□□□ -0.37
Col6a4A2AX52 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC12.75□□□□□ -0.37
Col6a4A2AX52 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Col6a4A2AX52 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col6a4A2AX52 Gm6218-201ENSMUST00000219812 628 ntBASIC12.75□□□□□ -0.37
Col6a4A2AX52 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col6a4A2AX52 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col6a4A2AX52 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col6a4A2AX52 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col6a4A2AX52 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col6a4A2AX52 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col6a4A2AX52 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col6a4A2AX52 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col6a4A2AX52 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col6a4A2AX52 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC12.75□□□□□ -0.37
Col6a4A2AX52 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col6a4A2AX52 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col6a4A2AX52 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col6a4A2AX52 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col6a4A2AX52 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Col6a4A2AX52 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col6a4A2AX52 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC12.74□□□□□ -0.37
Col6a4A2AX52 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC12.74□□□□□ -0.37
Col6a4A2AX52 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Col6a4A2AX52 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC12.74□□□□□ -0.37
Col6a4A2AX52 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC12.74□□□□□ -0.37
Col6a4A2AX52 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC12.74□□□□□ -0.37
Col6a4A2AX52 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col6a4A2AX52 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col6a4A2AX52 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col6a4A2AX52 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col6a4A2AX52 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col6a4A2AX52 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Col6a4A2AX52 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col6a4A2AX52 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Col6a4A2AX52 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Col6a4A2AX52 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col6a4A2AX52 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col6a4A2AX52 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col6a4A2AX52 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
Col6a4A2AX52 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC12.74□□□□□ -0.37
Col6a4A2AX52 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col6a4A2AX52 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col6a4A2AX52 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col6a4A2AX52 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Col6a4A2AX52 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col6a4A2AX52 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Col6a4A2AX52 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col6a4A2AX52 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col6a4A2AX52 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Col6a4A2AX52 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col6a4A2AX52 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col6a4A2AX52 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Col6a4A2AX52 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col6a4A2AX52 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col6a4A2AX52 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col6a4A2AX52 Gm18737-201ENSMUST00000173594 937 ntBASIC12.73□□□□□ -0.37
Col6a4A2AX52 Gm28630-201ENSMUST00000187806 498 ntBASIC12.73□□□□□ -0.37
Col6a4A2AX52 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC12.73□□□□□ -0.37
Col6a4A2AX52 Gm43433-201ENSMUST00000196573 481 ntBASIC12.73□□□□□ -0.37
Col6a4A2AX52 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col6a4A2AX52 Gm18049-201ENSMUST00000208909 581 ntBASIC12.73□□□□□ -0.37
Col6a4A2AX52 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col6a4A2AX52 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC12.73□□□□□ -0.37
Col6a4A2AX52 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
Col6a4A2AX52 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col6a4A2AX52 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col6a4A2AX52 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col6a4A2AX52 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Col6a4A2AX52 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col6a4A2AX52 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col6a4A2AX52 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col6a4A2AX52 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC12.73□□□□□ -0.37
Col6a4A2AX52 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Col6a4A2AX52 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Col6a4A2AX52 Gm18766-201ENSMUST00000189811 808 ntBASIC12.73□□□□□ -0.37
Col6a4A2AX52 Gm42612-201ENSMUST00000197986 623 ntBASIC12.73□□□□□ -0.37
Col6a4A2AX52 Gm43170-201ENSMUST00000199827 612 ntBASIC12.73□□□□□ -0.37
Col6a4A2AX52 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Col6a4A2AX52 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col6a4A2AX52 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col6a4A2AX52 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col6a4A2AX52 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col6a4A2AX52 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col6a4A2AX52 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Col6a4A2AX52 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col6a4A2AX52 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col6a4A2AX52 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col6a4A2AX52 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Col6a4A2AX52 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col6a4A2AX52 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col6a4A2AX52 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col6a4A2AX52 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms