Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 Gm8194-201ENSMUST00000159783 859 ntBASIC7.84□□□□□ -1.15
Ubr4A2AN08 Gm34908-201ENSMUST00000207222 569 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Ubr4A2AN08 Gm17823-201ENSMUST00000217830 1006 ntBASIC7.84□□□□□ -1.15
Ubr4A2AN08 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Ubr4A2AN08 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC7.84□□□□□ -1.15
Ubr4A2AN08 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Ubr4A2AN08 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC7.84□□□□□ -1.16
Ubr4A2AN08 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC7.84□□□□□ -1.16
Ubr4A2AN08 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.16
Ubr4A2AN08 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.16
Ubr4A2AN08 Gm13954-201ENSMUST00000123441 543 ntTSL 3 BASIC7.83□□□□□ -1.16
Ubr4A2AN08 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC7.83□□□□□ -1.16
Ubr4A2AN08 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
Ubr4A2AN08 Gm29310-201ENSMUST00000185468 696 ntBASIC7.83□□□□□ -1.16
Ubr4A2AN08 Gm21825-201ENSMUST00000185728 696 ntBASIC7.83□□□□□ -1.16
Ubr4A2AN08 Gm29109-201ENSMUST00000185895 696 ntBASIC7.83□□□□□ -1.16
Ubr4A2AN08 Gm21896-201ENSMUST00000186520 696 ntBASIC7.83□□□□□ -1.16
Ubr4A2AN08 Gm21873-201ENSMUST00000186728 696 ntBASIC7.83□□□□□ -1.16
Ubr4A2AN08 Gm21794-201ENSMUST00000187056 696 ntBASIC7.83□□□□□ -1.16
Ubr4A2AN08 Gm21880-201ENSMUST00000187275 696 ntBASIC7.83□□□□□ -1.16
Ubr4A2AN08 Gm21826-201ENSMUST00000187451 696 ntBASIC7.83□□□□□ -1.16
Ubr4A2AN08 Gm21198-201ENSMUST00000188393 696 ntBASIC7.83□□□□□ -1.16
Ubr4A2AN08 Gm21749-201ENSMUST00000189343 696 ntBASIC7.83□□□□□ -1.16
Ubr4A2AN08 Gm21901-201ENSMUST00000189568 696 ntBASIC7.83□□□□□ -1.16
Ubr4A2AN08 Gm29424-201ENSMUST00000189716 696 ntBASIC7.83□□□□□ -1.16
Ubr4A2AN08 Gm28599-201ENSMUST00000189838 694 ntBASIC7.83□□□□□ -1.16
Ubr4A2AN08 Gm21867-201ENSMUST00000189917 696 ntBASIC7.83□□□□□ -1.16
Ubr4A2AN08 Gm29269-201ENSMUST00000190087 696 ntBASIC7.83□□□□□ -1.16
Ubr4A2AN08 Gm21722-201ENSMUST00000190153 696 ntBASIC7.83□□□□□ -1.16
Ubr4A2AN08 Gm28423-201ENSMUST00000190701 696 ntBASIC7.83□□□□□ -1.16
Ubr4A2AN08 Gm21899-201ENSMUST00000190745 696 ntBASIC7.83□□□□□ -1.16
Ubr4A2AN08 Gm21910-201ENSMUST00000191163 696 ntBASIC7.83□□□□□ -1.16
Ubr4A2AN08 Gm21849-201ENSMUST00000191571 696 ntBASIC7.83□□□□□ -1.16
Ubr4A2AN08 Gm28678-201ENSMUST00000191593 696 ntBASIC7.83□□□□□ -1.16
Ubr4A2AN08 Gm20910-201ENSMUST00000193268 696 ntBASIC7.83□□□□□ -1.16
Ubr4A2AN08 Gm21871-201ENSMUST00000194621 696 ntBASIC7.83□□□□□ -1.16
Ubr4A2AN08 Gm7902-201ENSMUST00000198842 947 ntBASIC7.83□□□□□ -1.16
Ubr4A2AN08 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC7.83□□□□□ -1.16
Ubr4A2AN08 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Ubr4A2AN08 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC7.83□□□□□ -1.16
Ubr4A2AN08 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Ubr4A2AN08 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC7.83□□□□□ -1.16
Ubr4A2AN08 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Ubr4A2AN08 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Ubr4A2AN08 Gm16177-201ENSMUST00000120728 718 ntBASIC7.83□□□□□ -1.16
Ubr4A2AN08 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Ubr4A2AN08 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Ubr4A2AN08 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC7.83□□□□□ -1.16
Ubr4A2AN08 1700020A23Rik-203ENSMUST00000189961 541 ntAPPRIS P1 TSL 5 BASIC7.83□□□□□ -1.16
Ubr4A2AN08 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
Ubr4A2AN08 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Ubr4A2AN08 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC7.83□□□□□ -1.16
Ubr4A2AN08 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Ubr4A2AN08 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC7.83□□□□□ -1.16
Ubr4A2AN08 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC7.83□□□□□ -1.16
Ubr4A2AN08 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Ubr4A2AN08 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Ubr4A2AN08 Gm9279-201ENSMUST00000223175 1606 ntBASIC7.83□□□□□ -1.16
Ubr4A2AN08 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC7.83□□□□□ -1.16
Ubr4A2AN08 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC7.83□□□□□ -1.16
Ubr4A2AN08 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC7.83□□□□□ -1.16
Ubr4A2AN08 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Ubr4A2AN08 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Ubr4A2AN08 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Ubr4A2AN08 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC7.83□□□□□ -1.16
Ubr4A2AN08 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Ubr4A2AN08 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
Ubr4A2AN08 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC7.83□□□□□ -1.16
Ubr4A2AN08 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Ubr4A2AN08 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Ubr4A2AN08 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Ubr4A2AN08 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Ubr4A2AN08 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC7.83□□□□□ -1.16
Ubr4A2AN08 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Ubr4A2AN08 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Ubr4A2AN08 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Ubr4A2AN08 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC7.83□□□□□ -1.16
Ubr4A2AN08 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Ubr4A2AN08 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC7.83□□□□□ -1.16
Ubr4A2AN08 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC7.83□□□□□ -1.16
Ubr4A2AN08 Gm24255-201ENSMUST00000104481 128 ntBASIC7.83□□□□□ -1.16
Ubr4A2AN08 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Ubr4A2AN08 Gm44985-201ENSMUST00000206202 1016 ntBASIC7.83□□□□□ -1.16
Ubr4A2AN08 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Ubr4A2AN08 Gm6627-201ENSMUST00000218299 2386 ntBASIC7.83□□□□□ -1.16
Ubr4A2AN08 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Ubr4A2AN08 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Ubr4A2AN08 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC7.82□□□□□ -1.16
Ubr4A2AN08 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Ubr4A2AN08 Gm5850-201ENSMUST00000192923 1206 ntBASIC7.82□□□□□ -1.16
Ubr4A2AN08 Gm43818-201ENSMUST00000200605 466 ntBASIC7.82□□□□□ -1.16
Ubr4A2AN08 Gm40652-201ENSMUST00000218944 895 ntTSL 5 BASIC7.82□□□□□ -1.16
Ubr4A2AN08 Gm10012-201ENSMUST00000078252 192 ntBASIC7.82□□□□□ -1.16
Ubr4A2AN08 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Ubr4A2AN08 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Ubr4A2AN08 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Ubr4A2AN08 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC7.82□□□□□ -1.16
Ubr4A2AN08 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC7.82□□□□□ -1.16
Ubr4A2AN08 AC123834.2-201ENSMUST00000224038 2340 ntBASIC7.82□□□□□ -1.16
Ubr4A2AN08 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms