Protein–RNA interactions for Protein: A0A1B0GSS6

Gm3854, Predicted gene 3854, mousemouse

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3854A0A1B0GSS6 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Gm3854A0A1B0GSS6 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
Gm3854A0A1B0GSS6 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Gm3854A0A1B0GSS6 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Gm3854A0A1B0GSS6 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Gm3854A0A1B0GSS6 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC15.09■□□□□ 0.01
Gm3854A0A1B0GSS6 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Gm3854A0A1B0GSS6 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC15.09■□□□□ 0.01
Gm3854A0A1B0GSS6 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC15.09■□□□□ 0.01
Gm3854A0A1B0GSS6 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Gm3854A0A1B0GSS6 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Gm3854A0A1B0GSS6 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Gm3854A0A1B0GSS6 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Gm3854A0A1B0GSS6 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Gm3854A0A1B0GSS6 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Gm3854A0A1B0GSS6 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Gm3854A0A1B0GSS6 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Gm3854A0A1B0GSS6 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Gm3854A0A1B0GSS6 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
Gm3854A0A1B0GSS6 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC15.09■□□□□ 0.01
Gm3854A0A1B0GSS6 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Gm3854A0A1B0GSS6 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC15.09■□□□□ 0.01
Gm3854A0A1B0GSS6 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Gm3854A0A1B0GSS6 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Gm3854A0A1B0GSS6 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Gm3854A0A1B0GSS6 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Gm3854A0A1B0GSS6 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Gm3854A0A1B0GSS6 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Gm3854A0A1B0GSS6 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Gm3854A0A1B0GSS6 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC15.08■□□□□ 0
Gm3854A0A1B0GSS6 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC15.08■□□□□ 0
Gm3854A0A1B0GSS6 Gm8597-201ENSMUST00000191525 1109 ntBASIC15.08■□□□□ 0
Gm3854A0A1B0GSS6 AC125206.2-201ENSMUST00000217454 574 ntBASIC15.08■□□□□ 0
Gm3854A0A1B0GSS6 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC15.08■□□□□ 0
Gm3854A0A1B0GSS6 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Gm3854A0A1B0GSS6 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC15.08■□□□□ 0
Gm3854A0A1B0GSS6 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Gm3854A0A1B0GSS6 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC15.08■□□□□ 0
Gm3854A0A1B0GSS6 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Gm3854A0A1B0GSS6 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Gm3854A0A1B0GSS6 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
Gm3854A0A1B0GSS6 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Gm3854A0A1B0GSS6 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC15.08■□□□□ 0
Gm3854A0A1B0GSS6 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Gm3854A0A1B0GSS6 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Gm3854A0A1B0GSS6 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Gm3854A0A1B0GSS6 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC15.07■□□□□ 0
Gm3854A0A1B0GSS6 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Gm3854A0A1B0GSS6 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC15.07■□□□□ 0
Gm3854A0A1B0GSS6 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC15.07■□□□□ 0
Gm3854A0A1B0GSS6 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC15.07■□□□□ 0
Gm3854A0A1B0GSS6 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Gm3854A0A1B0GSS6 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC15.07■□□□□ 0
Gm3854A0A1B0GSS6 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Gm3854A0A1B0GSS6 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC15.07■□□□□ 0
Gm3854A0A1B0GSS6 Gm27989-201ENSMUST00000184721 107 ntBASIC15.07■□□□□ 0
Gm3854A0A1B0GSS6 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
Gm3854A0A1B0GSS6 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC15.07■□□□□ 0
Gm3854A0A1B0GSS6 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Gm3854A0A1B0GSS6 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC15.07■□□□□ 0
Gm3854A0A1B0GSS6 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC15.07■□□□□ 0
Gm3854A0A1B0GSS6 Gm42934-201ENSMUST00000196920 1345 ntBASIC15.07■□□□□ 0
Gm3854A0A1B0GSS6 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC15.07■□□□□ 0
Gm3854A0A1B0GSS6 Gm13233-201ENSMUST00000118760 1443 ntBASIC15.07■□□□□ 0
Gm3854A0A1B0GSS6 Gm13244-201ENSMUST00000118855 1446 ntBASIC15.07■□□□□ 0
Gm3854A0A1B0GSS6 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Gm3854A0A1B0GSS6 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Gm3854A0A1B0GSS6 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC15.07■□□□□ 0
Gm3854A0A1B0GSS6 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
Gm3854A0A1B0GSS6 Gm42473-201ENSMUST00000201056 2291 ntBASIC15.06■□□□□ 0
Gm3854A0A1B0GSS6 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Gm3854A0A1B0GSS6 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Gm3854A0A1B0GSS6 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Gm3854A0A1B0GSS6 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC15.06■□□□□ 0
Gm3854A0A1B0GSS6 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Gm3854A0A1B0GSS6 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Gm3854A0A1B0GSS6 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC15.06■□□□□ 0
Gm3854A0A1B0GSS6 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Gm3854A0A1B0GSS6 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Gm3854A0A1B0GSS6 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Gm3854A0A1B0GSS6 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC15.06■□□□□ 0
Gm3854A0A1B0GSS6 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Gm3854A0A1B0GSS6 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Gm3854A0A1B0GSS6 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Gm3854A0A1B0GSS6 Gm15593-201ENSMUST00000122085 1008 ntBASIC15.06■□□□□ 0
Gm3854A0A1B0GSS6 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC15.06■□□□□ 0
Gm3854A0A1B0GSS6 Gm27437-201ENSMUST00000183429 107 ntBASIC15.06■□□□□ 0
Gm3854A0A1B0GSS6 Gm27920-201ENSMUST00000183953 96 ntBASIC15.06■□□□□ 0
Gm3854A0A1B0GSS6 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC15.06■□□□□ 0
Gm3854A0A1B0GSS6 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC15.06■□□□□ 0
Gm3854A0A1B0GSS6 Gm6888-201ENSMUST00000221983 706 ntBASIC15.06■□□□□ 0
Gm3854A0A1B0GSS6 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Gm3854A0A1B0GSS6 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Gm3854A0A1B0GSS6 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Gm3854A0A1B0GSS6 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Gm3854A0A1B0GSS6 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Gm3854A0A1B0GSS6 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Gm3854A0A1B0GSS6 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Gm3854A0A1B0GSS6 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Gm3854A0A1B0GSS6 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC15.06■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms