Protein–RNA interactions for Protein: A0A140LIT1

Ccdc194, Coiled-coil domain-containing protein 194, mousemouse

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc194A0A140LIT1 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Ccdc194A0A140LIT1 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ccdc194A0A140LIT1 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ccdc194A0A140LIT1 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Ccdc194A0A140LIT1 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Ccdc194A0A140LIT1 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ccdc194A0A140LIT1 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC15.06■□□□□ 0
Ccdc194A0A140LIT1 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC15.06■□□□□ 0
Ccdc194A0A140LIT1 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC15.06■□□□□ 0
Ccdc194A0A140LIT1 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC15.06■□□□□ 0
Ccdc194A0A140LIT1 Gm30437-201ENSMUST00000206086 1201 ntBASIC15.06■□□□□ 0
Ccdc194A0A140LIT1 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC15.06■□□□□ 0
Ccdc194A0A140LIT1 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ccdc194A0A140LIT1 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Ccdc194A0A140LIT1 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC15.06■□□□□ 0
Ccdc194A0A140LIT1 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ccdc194A0A140LIT1 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC15.06■□□□□ 0
Ccdc194A0A140LIT1 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ccdc194A0A140LIT1 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Ccdc194A0A140LIT1 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
Ccdc194A0A140LIT1 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC15.05■□□□□ 0
Ccdc194A0A140LIT1 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
Ccdc194A0A140LIT1 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Ccdc194A0A140LIT1 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Ccdc194A0A140LIT1 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ccdc194A0A140LIT1 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Ccdc194A0A140LIT1 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC15.05■□□□□ -0
Ccdc194A0A140LIT1 Gm8318-201ENSMUST00000182954 872 ntBASIC15.05■□□□□ -0
Ccdc194A0A140LIT1 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC15.05■□□□□ -0
Ccdc194A0A140LIT1 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ccdc194A0A140LIT1 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ccdc194A0A140LIT1 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ccdc194A0A140LIT1 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
Ccdc194A0A140LIT1 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC15.05■□□□□ -0
Ccdc194A0A140LIT1 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC15.05■□□□□ -0
Ccdc194A0A140LIT1 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC15.05■□□□□ -0
Ccdc194A0A140LIT1 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ccdc194A0A140LIT1 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ccdc194A0A140LIT1 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ccdc194A0A140LIT1 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC15.05■□□□□ -0
Ccdc194A0A140LIT1 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Ccdc194A0A140LIT1 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Ccdc194A0A140LIT1 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ccdc194A0A140LIT1 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Ccdc194A0A140LIT1 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Ccdc194A0A140LIT1 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ccdc194A0A140LIT1 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ccdc194A0A140LIT1 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ccdc194A0A140LIT1 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Ccdc194A0A140LIT1 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ccdc194A0A140LIT1 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC15.04■□□□□ -0
Ccdc194A0A140LIT1 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Ccdc194A0A140LIT1 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Ccdc194A0A140LIT1 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ccdc194A0A140LIT1 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC15.04■□□□□ -0
Ccdc194A0A140LIT1 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC15.04■□□□□ -0
Ccdc194A0A140LIT1 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC15.04■□□□□ -0
Ccdc194A0A140LIT1 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC15.04■□□□□ -0
Ccdc194A0A140LIT1 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC15.04■□□□□ -0
Ccdc194A0A140LIT1 Gm18669-201ENSMUST00000216049 778 ntBASIC15.04■□□□□ -0
Ccdc194A0A140LIT1 Rbfox2-207ENSMUST00000227533 1041 ntBASIC15.04■□□□□ -0
Ccdc194A0A140LIT1 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC15.04■□□□□ -0
Ccdc194A0A140LIT1 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC15.04■□□□□ -0
Ccdc194A0A140LIT1 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Ccdc194A0A140LIT1 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ccdc194A0A140LIT1 Ksr1-207ENSMUST00000226282 5260 ntBASIC15.04■□□□□ -0
Ccdc194A0A140LIT1 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Ccdc194A0A140LIT1 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Ccdc194A0A140LIT1 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ccdc194A0A140LIT1 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC15.03■□□□□ -0
Ccdc194A0A140LIT1 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ccdc194A0A140LIT1 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Ccdc194A0A140LIT1 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ccdc194A0A140LIT1 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC15.03■□□□□ -0
Ccdc194A0A140LIT1 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
Ccdc194A0A140LIT1 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
Ccdc194A0A140LIT1 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ccdc194A0A140LIT1 Gm8242-201ENSMUST00000193029 1420 ntBASIC15.03■□□□□ -0
Ccdc194A0A140LIT1 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC15.03■□□□□ -0
Ccdc194A0A140LIT1 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ccdc194A0A140LIT1 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC15.03■□□□□ -0
Ccdc194A0A140LIT1 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC15.03■□□□□ -0
Ccdc194A0A140LIT1 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ccdc194A0A140LIT1 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC15.03■□□□□ -0
Ccdc194A0A140LIT1 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Ccdc194A0A140LIT1 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
Ccdc194A0A140LIT1 Gm5357-201ENSMUST00000212720 1924 ntBASIC15.03■□□□□ -0
Ccdc194A0A140LIT1 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Ccdc194A0A140LIT1 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Ccdc194A0A140LIT1 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC15.03■□□□□ -0
Ccdc194A0A140LIT1 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ccdc194A0A140LIT1 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ccdc194A0A140LIT1 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Ccdc194A0A140LIT1 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Ccdc194A0A140LIT1 AC157650.3-201ENSMUST00000225058 1476 ntBASIC15.02■□□□□ -0
Ccdc194A0A140LIT1 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Ccdc194A0A140LIT1 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Ccdc194A0A140LIT1 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC15.02■□□□□ -0
Ccdc194A0A140LIT1 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC15.02■□□□□ -0
Ccdc194A0A140LIT1 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms