Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC11.48□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC11.48□□□□□ -0.57
Trav3n-3A0A0G2JEM0 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC11.48□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav3n-3A0A0G2JEM0 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC11.48□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav3n-3A0A0G2JEM0 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC11.47□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Gm26039-201ENSMUST00000158152 144 ntBASIC11.47□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC11.47□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC11.47□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Gm5417-201ENSMUST00000079706 384 ntBASIC11.47□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC11.47□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Gm26513-201ENSMUST00000181802 2489 ntBASIC11.47□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC11.47□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav3n-3A0A0G2JEM0 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Gm15442-201ENSMUST00000117905 1527 ntBASIC11.46□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Trav3n-3A0A0G2JEM0 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC11.46□□□□□ -0.57
Trav3n-3A0A0G2JEM0 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC11.46□□□□□ -0.57
Trav3n-3A0A0G2JEM0 AC159205.6-201ENSMUST00000224935 887 ntBASIC11.46□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC11.46□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Mbnl2-204ENSMUST00000227012 2390 ntBASIC11.46□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav3n-3A0A0G2JEM0 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC11.46□□□□□ -0.58
Trav3n-3A0A0G2JEM0 AC166491.1-201ENSMUST00000227053 2308 ntBASIC11.46□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC11.45□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Pcgf5-211ENSMUST00000225920 6443 ntBASIC11.45□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC11.45□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms