Protein–RNA interactions for Protein: A0A0A6YYE2

Trbv3, T cell receptor beta, variable 3 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv3A0A0A6YYE2 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trbv3A0A0A6YYE2 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC11.66□□□□□ -0.54
Trbv3A0A0A6YYE2 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trbv3A0A0A6YYE2 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trbv3A0A0A6YYE2 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trbv3A0A0A6YYE2 Gm37691-201ENSMUST00000192147 2573 ntBASIC11.66□□□□□ -0.54
Trbv3A0A0A6YYE2 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trbv3A0A0A6YYE2 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC11.66□□□□□ -0.54
Trbv3A0A0A6YYE2 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trbv3A0A0A6YYE2 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Trbv3A0A0A6YYE2 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trbv3A0A0A6YYE2 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Trbv3A0A0A6YYE2 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trbv3A0A0A6YYE2 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trbv3A0A0A6YYE2 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trbv3A0A0A6YYE2 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trbv3A0A0A6YYE2 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Trbv3A0A0A6YYE2 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Trbv3A0A0A6YYE2 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trbv3A0A0A6YYE2 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trbv3A0A0A6YYE2 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC11.66□□□□□ -0.54
Trbv3A0A0A6YYE2 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trbv3A0A0A6YYE2 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC11.66□□□□□ -0.54
Trbv3A0A0A6YYE2 Celf4-206ENSMUST00000224553 1729 ntBASIC11.66□□□□□ -0.54
Trbv3A0A0A6YYE2 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC11.66□□□□□ -0.54
Trbv3A0A0A6YYE2 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trbv3A0A0A6YYE2 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trbv3A0A0A6YYE2 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trbv3A0A0A6YYE2 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC11.65□□□□□ -0.54
Trbv3A0A0A6YYE2 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trbv3A0A0A6YYE2 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Trbv3A0A0A6YYE2 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Trbv3A0A0A6YYE2 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trbv3A0A0A6YYE2 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trbv3A0A0A6YYE2 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC11.65□□□□□ -0.54
Trbv3A0A0A6YYE2 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trbv3A0A0A6YYE2 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC11.65□□□□□ -0.54
Trbv3A0A0A6YYE2 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trbv3A0A0A6YYE2 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC11.65□□□□□ -0.54
Trbv3A0A0A6YYE2 Gm7507-201ENSMUST00000183053 1008 ntBASIC11.65□□□□□ -0.54
Trbv3A0A0A6YYE2 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC11.65□□□□□ -0.54
Trbv3A0A0A6YYE2 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC11.65□□□□□ -0.54
Trbv3A0A0A6YYE2 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trbv3A0A0A6YYE2 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trbv3A0A0A6YYE2 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trbv3A0A0A6YYE2 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Trbv3A0A0A6YYE2 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trbv3A0A0A6YYE2 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trbv3A0A0A6YYE2 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trbv3A0A0A6YYE2 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trbv3A0A0A6YYE2 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trbv3A0A0A6YYE2 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC11.65□□□□□ -0.54
Trbv3A0A0A6YYE2 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC11.65□□□□□ -0.54
Trbv3A0A0A6YYE2 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trbv3A0A0A6YYE2 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC11.65□□□□□ -0.54
Trbv3A0A0A6YYE2 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trbv3A0A0A6YYE2 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Trbv3A0A0A6YYE2 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.55
Trbv3A0A0A6YYE2 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Trbv3A0A0A6YYE2 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC11.65□□□□□ -0.55
Trbv3A0A0A6YYE2 Gm42632-201ENSMUST00000201707 2411 ntBASIC11.65□□□□□ -0.55
Trbv3A0A0A6YYE2 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Trbv3A0A0A6YYE2 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.55
Trbv3A0A0A6YYE2 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Trbv3A0A0A6YYE2 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trbv3A0A0A6YYE2 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trbv3A0A0A6YYE2 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trbv3A0A0A6YYE2 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trbv3A0A0A6YYE2 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Trbv3A0A0A6YYE2 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trbv3A0A0A6YYE2 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trbv3A0A0A6YYE2 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trbv3A0A0A6YYE2 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trbv3A0A0A6YYE2 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC11.64□□□□□ -0.55
Trbv3A0A0A6YYE2 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trbv3A0A0A6YYE2 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trbv3A0A0A6YYE2 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trbv3A0A0A6YYE2 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC11.64□□□□□ -0.55
Trbv3A0A0A6YYE2 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trbv3A0A0A6YYE2 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Trbv3A0A0A6YYE2 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trbv3A0A0A6YYE2 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC11.64□□□□□ -0.55
Trbv3A0A0A6YYE2 Gm25406-201ENSMUST00000157599 105 ntBASIC11.64□□□□□ -0.55
Trbv3A0A0A6YYE2 Mir5122-201ENSMUST00000175004 89 ntBASIC11.64□□□□□ -0.55
Trbv3A0A0A6YYE2 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trbv3A0A0A6YYE2 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC11.64□□□□□ -0.55
Trbv3A0A0A6YYE2 Gm37722-201ENSMUST00000193757 208 ntBASIC11.64□□□□□ -0.55
Trbv3A0A0A6YYE2 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trbv3A0A0A6YYE2 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC11.64□□□□□ -0.55
Trbv3A0A0A6YYE2 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trbv3A0A0A6YYE2 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC11.64□□□□□ -0.55
Trbv3A0A0A6YYE2 Gm9987-201ENSMUST00000069768 567 ntBASIC11.64□□□□□ -0.55
Trbv3A0A0A6YYE2 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trbv3A0A0A6YYE2 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trbv3A0A0A6YYE2 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trbv3A0A0A6YYE2 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trbv3A0A0A6YYE2 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trbv3A0A0A6YYE2 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trbv3A0A0A6YYE2 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC11.64□□□□□ -0.55
Trbv3A0A0A6YYE2 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 107.3 ms