Protein–RNA interactions for Protein: A0A0A6YY83

Pcdh7, Protocadherin 7, mousemouse

Predictions only

Length 1,255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh7A0A0A6YY83 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC15.55■□□□□ 0.08
Pcdh7A0A0A6YY83 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC15.55■□□□□ 0.08
Pcdh7A0A0A6YY83 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdh7A0A0A6YY83 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC15.55■□□□□ 0.08
Pcdh7A0A0A6YY83 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC15.55■□□□□ 0.08
Pcdh7A0A0A6YY83 Psmb5-202ENSMUST00000227257 622 ntBASIC15.55■□□□□ 0.08
Pcdh7A0A0A6YY83 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdh7A0A0A6YY83 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdh7A0A0A6YY83 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Pcdh7A0A0A6YY83 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdh7A0A0A6YY83 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Pcdh7A0A0A6YY83 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC15.55■□□□□ 0.08
Pcdh7A0A0A6YY83 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdh7A0A0A6YY83 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
Pcdh7A0A0A6YY83 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC15.54■□□□□ 0.08
Pcdh7A0A0A6YY83 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdh7A0A0A6YY83 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdh7A0A0A6YY83 AC174678.1-201ENSMUST00000228007 2749 ntBASIC15.54■□□□□ 0.08
Pcdh7A0A0A6YY83 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdh7A0A0A6YY83 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdh7A0A0A6YY83 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdh7A0A0A6YY83 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdh7A0A0A6YY83 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdh7A0A0A6YY83 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC15.54■□□□□ 0.08
Pcdh7A0A0A6YY83 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC15.54■□□□□ 0.08
Pcdh7A0A0A6YY83 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC15.54■□□□□ 0.08
Pcdh7A0A0A6YY83 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdh7A0A0A6YY83 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC15.54■□□□□ 0.08
Pcdh7A0A0A6YY83 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdh7A0A0A6YY83 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdh7A0A0A6YY83 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdh7A0A0A6YY83 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdh7A0A0A6YY83 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdh7A0A0A6YY83 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC15.54■□□□□ 0.08
Pcdh7A0A0A6YY83 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdh7A0A0A6YY83 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdh7A0A0A6YY83 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdh7A0A0A6YY83 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdh7A0A0A6YY83 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdh7A0A0A6YY83 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdh7A0A0A6YY83 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdh7A0A0A6YY83 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdh7A0A0A6YY83 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdh7A0A0A6YY83 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdh7A0A0A6YY83 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdh7A0A0A6YY83 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdh7A0A0A6YY83 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdh7A0A0A6YY83 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC15.53■□□□□ 0.08
Pcdh7A0A0A6YY83 Gm1401-201ENSMUST00000122048 772 ntBASIC15.53■□□□□ 0.08
Pcdh7A0A0A6YY83 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC15.53■□□□□ 0.08
Pcdh7A0A0A6YY83 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC15.53■□□□□ 0.08
Pcdh7A0A0A6YY83 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Pcdh7A0A0A6YY83 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdh7A0A0A6YY83 AC122901.1-201ENSMUST00000214203 1790 ntBASIC15.53■□□□□ 0.08
Pcdh7A0A0A6YY83 AC154412.1-201ENSMUST00000226540 2786 ntBASIC15.53■□□□□ 0.08
Pcdh7A0A0A6YY83 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdh7A0A0A6YY83 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC15.53■□□□□ 0.08
Pcdh7A0A0A6YY83 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdh7A0A0A6YY83 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC15.53■□□□□ 0.08
Pcdh7A0A0A6YY83 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdh7A0A0A6YY83 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdh7A0A0A6YY83 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdh7A0A0A6YY83 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdh7A0A0A6YY83 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdh7A0A0A6YY83 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdh7A0A0A6YY83 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdh7A0A0A6YY83 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdh7A0A0A6YY83 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdh7A0A0A6YY83 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdh7A0A0A6YY83 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdh7A0A0A6YY83 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdh7A0A0A6YY83 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdh7A0A0A6YY83 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdh7A0A0A6YY83 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdh7A0A0A6YY83 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdh7A0A0A6YY83 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdh7A0A0A6YY83 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdh7A0A0A6YY83 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdh7A0A0A6YY83 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC15.52■□□□□ 0.08
Pcdh7A0A0A6YY83 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdh7A0A0A6YY83 Gm2272-201ENSMUST00000194903 582 ntBASIC15.52■□□□□ 0.08
Pcdh7A0A0A6YY83 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC15.52■□□□□ 0.08
Pcdh7A0A0A6YY83 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdh7A0A0A6YY83 Gm14780-201ENSMUST00000118387 2737 ntBASIC15.52■□□□□ 0.08
Pcdh7A0A0A6YY83 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdh7A0A0A6YY83 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdh7A0A0A6YY83 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdh7A0A0A6YY83 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdh7A0A0A6YY83 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdh7A0A0A6YY83 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdh7A0A0A6YY83 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdh7A0A0A6YY83 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
Pcdh7A0A0A6YY83 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.07
Pcdh7A0A0A6YY83 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Pcdh7A0A0A6YY83 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdh7A0A0A6YY83 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdh7A0A0A6YY83 Gm21009-201ENSMUST00000197169 1669 ntBASIC15.51■□□□□ 0.07
Pcdh7A0A0A6YY83 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdh7A0A0A6YY83 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdh7A0A0A6YY83 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms