Protein–RNA interactions for Protein: A0A075B6B4

Trav6-4, T cell receptor alpha variable 6-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-4A0A075B6B4 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav6-4A0A075B6B4 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav6-4A0A075B6B4 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Trav6-4A0A075B6B4 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC11.65□□□□□ -0.54
Trav6-4A0A075B6B4 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC11.65□□□□□ -0.54
Trav6-4A0A075B6B4 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC11.65□□□□□ -0.54
Trav6-4A0A075B6B4 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC11.65□□□□□ -0.54
Trav6-4A0A075B6B4 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC11.65□□□□□ -0.54
Trav6-4A0A075B6B4 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav6-4A0A075B6B4 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trav6-4A0A075B6B4 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC11.65□□□□□ -0.54
Trav6-4A0A075B6B4 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Trav6-4A0A075B6B4 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav6-4A0A075B6B4 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav6-4A0A075B6B4 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Trav6-4A0A075B6B4 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Trav6-4A0A075B6B4 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav6-4A0A075B6B4 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav6-4A0A075B6B4 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav6-4A0A075B6B4 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trav6-4A0A075B6B4 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav6-4A0A075B6B4 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trav6-4A0A075B6B4 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC11.65□□□□□ -0.55
Trav6-4A0A075B6B4 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.55
Trav6-4A0A075B6B4 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Trav6-4A0A075B6B4 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav6-4A0A075B6B4 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav6-4A0A075B6B4 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav6-4A0A075B6B4 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Trav6-4A0A075B6B4 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav6-4A0A075B6B4 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC11.64□□□□□ -0.55
Trav6-4A0A075B6B4 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav6-4A0A075B6B4 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
Trav6-4A0A075B6B4 Gm5049-201ENSMUST00000195878 1590 ntBASIC11.64□□□□□ -0.55
Trav6-4A0A075B6B4 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav6-4A0A075B6B4 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
Trav6-4A0A075B6B4 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Trav6-4A0A075B6B4 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC11.64□□□□□ -0.55
Trav6-4A0A075B6B4 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC11.64□□□□□ -0.55
Trav6-4A0A075B6B4 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav6-4A0A075B6B4 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Trav6-4A0A075B6B4 Gm27628-201ENSMUST00000184911 107 ntBASIC11.64□□□□□ -0.55
Trav6-4A0A075B6B4 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC11.64□□□□□ -0.55
Trav6-4A0A075B6B4 Gm42670-201ENSMUST00000201816 1292 ntBASIC11.64□□□□□ -0.55
Trav6-4A0A075B6B4 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav6-4A0A075B6B4 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav6-4A0A075B6B4 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav6-4A0A075B6B4 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Trav6-4A0A075B6B4 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav6-4A0A075B6B4 Gm11839-201ENSMUST00000120647 1953 ntBASIC11.64□□□□□ -0.55
Trav6-4A0A075B6B4 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC11.64□□□□□ -0.55
Trav6-4A0A075B6B4 Gm45293-201ENSMUST00000209754 1812 ntBASIC11.64□□□□□ -0.55
Trav6-4A0A075B6B4 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav6-4A0A075B6B4 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav6-4A0A075B6B4 CT010478.1-201ENSMUST00000220747 2787 ntBASIC11.64□□□□□ -0.55
Trav6-4A0A075B6B4 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trav6-4A0A075B6B4 Best4-ps-201ENSMUST00000129783 1380 ntBASIC11.64□□□□□ -0.55
Trav6-4A0A075B6B4 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Trav6-4A0A075B6B4 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Trav6-4A0A075B6B4 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC11.64□□□□□ -0.55
Trav6-4A0A075B6B4 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Trav6-4A0A075B6B4 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav6-4A0A075B6B4 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav6-4A0A075B6B4 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC11.64□□□□□ -0.55
Trav6-4A0A075B6B4 Tfap2a-203ENSMUST00000223869 2037 ntBASIC11.64□□□□□ -0.55
Trav6-4A0A075B6B4 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC11.64□□□□□ -0.55
Trav6-4A0A075B6B4 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav6-4A0A075B6B4 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav6-4A0A075B6B4 Gm5184-201ENSMUST00000220417 1702 ntBASIC11.63□□□□□ -0.55
Trav6-4A0A075B6B4 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav6-4A0A075B6B4 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav6-4A0A075B6B4 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC11.63□□□□□ -0.55
Trav6-4A0A075B6B4 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav6-4A0A075B6B4 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC11.63□□□□□ -0.55
Trav6-4A0A075B6B4 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC11.63□□□□□ -0.55
Trav6-4A0A075B6B4 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC11.63□□□□□ -0.55
Trav6-4A0A075B6B4 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav6-4A0A075B6B4 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav6-4A0A075B6B4 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav6-4A0A075B6B4 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trav6-4A0A075B6B4 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC11.63□□□□□ -0.55
Trav6-4A0A075B6B4 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trav6-4A0A075B6B4 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trav6-4A0A075B6B4 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC11.63□□□□□ -0.55
Trav6-4A0A075B6B4 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC11.63□□□□□ -0.55
Trav6-4A0A075B6B4 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav6-4A0A075B6B4 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav6-4A0A075B6B4 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav6-4A0A075B6B4 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav6-4A0A075B6B4 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav6-4A0A075B6B4 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav6-4A0A075B6B4 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav6-4A0A075B6B4 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC11.63□□□□□ -0.55
Trav6-4A0A075B6B4 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav6-4A0A075B6B4 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav6-4A0A075B6B4 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav6-4A0A075B6B4 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav6-4A0A075B6B4 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trav6-4A0A075B6B4 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav6-4A0A075B6B4 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 75.7 ms