Protein–RNA interactions for Protein: A0A075B6B0

Trav6d-7, T cell receptor alpha variable 6D-7 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-7A0A075B6B0 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav6d-7A0A075B6B0 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav6d-7A0A075B6B0 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC11.71□□□□□ -0.54
Trav6d-7A0A075B6B0 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav6d-7A0A075B6B0 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav6d-7A0A075B6B0 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC11.71□□□□□ -0.54
Trav6d-7A0A075B6B0 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC11.71□□□□□ -0.54
Trav6d-7A0A075B6B0 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav6d-7A0A075B6B0 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC11.71□□□□□ -0.54
Trav6d-7A0A075B6B0 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Trav6d-7A0A075B6B0 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav6d-7A0A075B6B0 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC11.7□□□□□ -0.54
Trav6d-7A0A075B6B0 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav6d-7A0A075B6B0 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav6d-7A0A075B6B0 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trav6d-7A0A075B6B0 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav6d-7A0A075B6B0 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trav6d-7A0A075B6B0 Gm18856-201ENSMUST00000178096 1374 ntBASIC11.7□□□□□ -0.54
Trav6d-7A0A075B6B0 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC11.7□□□□□ -0.54
Trav6d-7A0A075B6B0 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav6d-7A0A075B6B0 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav6d-7A0A075B6B0 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav6d-7A0A075B6B0 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC11.7□□□□□ -0.54
Trav6d-7A0A075B6B0 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav6d-7A0A075B6B0 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC11.7□□□□□ -0.54
Trav6d-7A0A075B6B0 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trav6d-7A0A075B6B0 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trav6d-7A0A075B6B0 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav6d-7A0A075B6B0 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trav6d-7A0A075B6B0 Gm6443-201ENSMUST00000203599 874 ntBASIC11.7□□□□□ -0.54
Trav6d-7A0A075B6B0 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC11.7□□□□□ -0.54
Trav6d-7A0A075B6B0 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Trav6d-7A0A075B6B0 AC160338.1-201ENSMUST00000214232 705 ntBASIC11.7□□□□□ -0.54
Trav6d-7A0A075B6B0 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav6d-7A0A075B6B0 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Trav6d-7A0A075B6B0 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav6d-7A0A075B6B0 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav6d-7A0A075B6B0 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav6d-7A0A075B6B0 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav6d-7A0A075B6B0 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav6d-7A0A075B6B0 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC11.7□□□□□ -0.54
Trav6d-7A0A075B6B0 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Trav6d-7A0A075B6B0 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav6d-7A0A075B6B0 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav6d-7A0A075B6B0 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav6d-7A0A075B6B0 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Trav6d-7A0A075B6B0 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Trav6d-7A0A075B6B0 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC11.69□□□□□ -0.54
Trav6d-7A0A075B6B0 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav6d-7A0A075B6B0 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav6d-7A0A075B6B0 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav6d-7A0A075B6B0 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC11.69□□□□□ -0.54
Trav6d-7A0A075B6B0 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav6d-7A0A075B6B0 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav6d-7A0A075B6B0 Gm7669-201ENSMUST00000210184 1603 ntBASIC11.69□□□□□ -0.54
Trav6d-7A0A075B6B0 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav6d-7A0A075B6B0 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav6d-7A0A075B6B0 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav6d-7A0A075B6B0 Gm12134-201ENSMUST00000122109 520 ntBASIC11.69□□□□□ -0.54
Trav6d-7A0A075B6B0 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC11.69□□□□□ -0.54
Trav6d-7A0A075B6B0 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav6d-7A0A075B6B0 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav6d-7A0A075B6B0 Gm7507-201ENSMUST00000183053 1008 ntBASIC11.69□□□□□ -0.54
Trav6d-7A0A075B6B0 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC11.69□□□□□ -0.54
Trav6d-7A0A075B6B0 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC11.69□□□□□ -0.54
Trav6d-7A0A075B6B0 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC11.69□□□□□ -0.54
Trav6d-7A0A075B6B0 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Trav6d-7A0A075B6B0 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Trav6d-7A0A075B6B0 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav6d-7A0A075B6B0 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC11.69□□□□□ -0.54
Trav6d-7A0A075B6B0 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav6d-7A0A075B6B0 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Trav6d-7A0A075B6B0 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC11.69□□□□□ -0.54
Trav6d-7A0A075B6B0 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav6d-7A0A075B6B0 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Trav6d-7A0A075B6B0 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav6d-7A0A075B6B0 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Trav6d-7A0A075B6B0 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC11.69□□□□□ -0.54
Trav6d-7A0A075B6B0 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Trav6d-7A0A075B6B0 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC11.69□□□□□ -0.54
Trav6d-7A0A075B6B0 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav6d-7A0A075B6B0 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav6d-7A0A075B6B0 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Trav6d-7A0A075B6B0 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav6d-7A0A075B6B0 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav6d-7A0A075B6B0 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav6d-7A0A075B6B0 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav6d-7A0A075B6B0 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav6d-7A0A075B6B0 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav6d-7A0A075B6B0 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav6d-7A0A075B6B0 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav6d-7A0A075B6B0 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Trav6d-7A0A075B6B0 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav6d-7A0A075B6B0 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav6d-7A0A075B6B0 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav6d-7A0A075B6B0 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Trav6d-7A0A075B6B0 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav6d-7A0A075B6B0 Mir6404-201ENSMUST00000183699 94 ntBASIC11.68□□□□□ -0.54
Trav6d-7A0A075B6B0 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC11.68□□□□□ -0.54
Trav6d-7A0A075B6B0 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 61.7 ms