Protein–RNA interactions for Protein: A0A075B655

Trav17, T cell receptor alpha variable 17 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav17A0A075B655 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav17A0A075B655 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav17A0A075B655 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC12.02□□□□□ -0.48
Trav17A0A075B655 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav17A0A075B655 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav17A0A075B655 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
Trav17A0A075B655 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav17A0A075B655 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC12.02□□□□□ -0.48
Trav17A0A075B655 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav17A0A075B655 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trav17A0A075B655 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav17A0A075B655 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav17A0A075B655 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav17A0A075B655 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav17A0A075B655 Gm10013-201ENSMUST00000106074 672 ntBASIC12.02□□□□□ -0.49
Trav17A0A075B655 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC12.02□□□□□ -0.49
Trav17A0A075B655 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC12.02□□□□□ -0.49
Trav17A0A075B655 Gm13312-201ENSMUST00000119631 718 ntBASIC12.02□□□□□ -0.49
Trav17A0A075B655 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC12.02□□□□□ -0.49
Trav17A0A075B655 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trav17A0A075B655 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trav17A0A075B655 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav17A0A075B655 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC12.02□□□□□ -0.49
Trav17A0A075B655 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC12.02□□□□□ -0.49
Trav17A0A075B655 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav17A0A075B655 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav17A0A075B655 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav17A0A075B655 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav17A0A075B655 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav17A0A075B655 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav17A0A075B655 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trav17A0A075B655 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav17A0A075B655 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trav17A0A075B655 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Trav17A0A075B655 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav17A0A075B655 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC12.02□□□□□ -0.49
Trav17A0A075B655 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trav17A0A075B655 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav17A0A075B655 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav17A0A075B655 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Trav17A0A075B655 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC12.01□□□□□ -0.49
Trav17A0A075B655 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC12.01□□□□□ -0.49
Trav17A0A075B655 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC12.01□□□□□ -0.49
Trav17A0A075B655 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav17A0A075B655 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC12.01□□□□□ -0.49
Trav17A0A075B655 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Trav17A0A075B655 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Trav17A0A075B655 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Trav17A0A075B655 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav17A0A075B655 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav17A0A075B655 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC12.01□□□□□ -0.49
Trav17A0A075B655 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav17A0A075B655 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav17A0A075B655 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav17A0A075B655 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav17A0A075B655 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC12.01□□□□□ -0.49
Trav17A0A075B655 Gm7286-201ENSMUST00000182691 1007 ntBASIC12.01□□□□□ -0.49
Trav17A0A075B655 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC12.01□□□□□ -0.49
Trav17A0A075B655 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC12.01□□□□□ -0.49
Trav17A0A075B655 AC153881.2-201ENSMUST00000214877 204 ntBASIC12.01□□□□□ -0.49
Trav17A0A075B655 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav17A0A075B655 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC12.01□□□□□ -0.49
Trav17A0A075B655 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC12.01□□□□□ -0.49
Trav17A0A075B655 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav17A0A075B655 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC12.01□□□□□ -0.49
Trav17A0A075B655 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav17A0A075B655 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav17A0A075B655 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav17A0A075B655 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav17A0A075B655 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav17A0A075B655 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav17A0A075B655 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Trav17A0A075B655 Sorbs3-204ENSMUST00000227929 2460 ntBASIC12.01□□□□□ -0.49
Trav17A0A075B655 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav17A0A075B655 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav17A0A075B655 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav17A0A075B655 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav17A0A075B655 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav17A0A075B655 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav17A0A075B655 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC12.01□□□□□ -0.49
Trav17A0A075B655 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav17A0A075B655 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav17A0A075B655 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav17A0A075B655 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC12.01□□□□□ -0.49
Trav17A0A075B655 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav17A0A075B655 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav17A0A075B655 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav17A0A075B655 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC12□□□□□ -0.49
Trav17A0A075B655 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav17A0A075B655 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav17A0A075B655 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Trav17A0A075B655 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav17A0A075B655 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC12□□□□□ -0.49
Trav17A0A075B655 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Trav17A0A075B655 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav17A0A075B655 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC12□□□□□ -0.49
Trav17A0A075B655 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Trav17A0A075B655 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav17A0A075B655 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC12□□□□□ -0.49
Trav17A0A075B655 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms