Protein–RNA interactions for Protein: A0A075B601

Trav9-1, T cell receptor alpha variable 9-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-1A0A075B601 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav9-1A0A075B601 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav9-1A0A075B601 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav9-1A0A075B601 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav9-1A0A075B601 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav9-1A0A075B601 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav9-1A0A075B601 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav9-1A0A075B601 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Trav9-1A0A075B601 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav9-1A0A075B601 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Trav9-1A0A075B601 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav9-1A0A075B601 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav9-1A0A075B601 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Trav9-1A0A075B601 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav9-1A0A075B601 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav9-1A0A075B601 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Trav9-1A0A075B601 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav9-1A0A075B601 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Trav9-1A0A075B601 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC11.82□□□□□ -0.52
Trav9-1A0A075B601 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC11.82□□□□□ -0.52
Trav9-1A0A075B601 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav9-1A0A075B601 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC11.82□□□□□ -0.52
Trav9-1A0A075B601 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
Trav9-1A0A075B601 Gm17807-201ENSMUST00000186869 298 ntBASIC11.82□□□□□ -0.52
Trav9-1A0A075B601 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC11.82□□□□□ -0.52
Trav9-1A0A075B601 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav9-1A0A075B601 AC158538.2-201ENSMUST00000225455 906 ntBASIC11.82□□□□□ -0.52
Trav9-1A0A075B601 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav9-1A0A075B601 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav9-1A0A075B601 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Trav9-1A0A075B601 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav9-1A0A075B601 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav9-1A0A075B601 Gm14780-201ENSMUST00000118387 2737 ntBASIC11.82□□□□□ -0.52
Trav9-1A0A075B601 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav9-1A0A075B601 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav9-1A0A075B601 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC11.82□□□□□ -0.52
Trav9-1A0A075B601 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav9-1A0A075B601 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Trav9-1A0A075B601 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav9-1A0A075B601 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav9-1A0A075B601 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Trav9-1A0A075B601 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Trav9-1A0A075B601 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav9-1A0A075B601 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav9-1A0A075B601 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav9-1A0A075B601 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav9-1A0A075B601 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav9-1A0A075B601 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trav9-1A0A075B601 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC11.81□□□□□ -0.52
Trav9-1A0A075B601 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav9-1A0A075B601 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Trav9-1A0A075B601 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav9-1A0A075B601 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC11.81□□□□□ -0.52
Trav9-1A0A075B601 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav9-1A0A075B601 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC11.81□□□□□ -0.52
Trav9-1A0A075B601 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav9-1A0A075B601 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav9-1A0A075B601 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trav9-1A0A075B601 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC11.81□□□□□ -0.52
Trav9-1A0A075B601 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC11.81□□□□□ -0.52
Trav9-1A0A075B601 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Trav9-1A0A075B601 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav9-1A0A075B601 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav9-1A0A075B601 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Trav9-1A0A075B601 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav9-1A0A075B601 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav9-1A0A075B601 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav9-1A0A075B601 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav9-1A0A075B601 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trav9-1A0A075B601 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav9-1A0A075B601 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav9-1A0A075B601 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav9-1A0A075B601 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav9-1A0A075B601 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav9-1A0A075B601 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav9-1A0A075B601 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC11.81□□□□□ -0.52
Trav9-1A0A075B601 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav9-1A0A075B601 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Trav9-1A0A075B601 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC11.8□□□□□ -0.52
Trav9-1A0A075B601 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Trav9-1A0A075B601 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Trav9-1A0A075B601 Gm5837-201ENSMUST00000191844 1369 ntBASIC11.8□□□□□ -0.52
Trav9-1A0A075B601 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav9-1A0A075B601 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav9-1A0A075B601 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav9-1A0A075B601 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC11.8□□□□□ -0.52
Trav9-1A0A075B601 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav9-1A0A075B601 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC11.8□□□□□ -0.52
Trav9-1A0A075B601 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav9-1A0A075B601 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav9-1A0A075B601 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Trav9-1A0A075B601 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav9-1A0A075B601 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC11.8□□□□□ -0.52
Trav9-1A0A075B601 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Trav9-1A0A075B601 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC11.8□□□□□ -0.52
Trav9-1A0A075B601 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav9-1A0A075B601 AC093926.2-201ENSMUST00000214468 1228 ntBASIC11.8□□□□□ -0.52
Trav9-1A0A075B601 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav9-1A0A075B601 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav9-1A0A075B601 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms