Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
H2afb2S4R1M3 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
H2afb2S4R1M3 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC15.15■□□□□ 0.02
H2afb2S4R1M3 Gm10060-201ENSMUST00000212002 111 ntBASIC15.15■□□□□ 0.02
H2afb2S4R1M3 Gm7787-201ENSMUST00000216858 688 ntBASIC15.15■□□□□ 0.02
H2afb2S4R1M3 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
H2afb2S4R1M3 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
H2afb2S4R1M3 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC15.15■□□□□ 0.02
H2afb2S4R1M3 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
H2afb2S4R1M3 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
H2afb2S4R1M3 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
H2afb2S4R1M3 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
H2afb2S4R1M3 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC15.15■□□□□ 0.02
H2afb2S4R1M3 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
H2afb2S4R1M3 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
H2afb2S4R1M3 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
H2afb2S4R1M3 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
H2afb2S4R1M3 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
H2afb2S4R1M3 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
H2afb2S4R1M3 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
H2afb2S4R1M3 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
H2afb2S4R1M3 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
H2afb2S4R1M3 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
H2afb2S4R1M3 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC15.15■□□□□ 0.02
H2afb2S4R1M3 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
H2afb2S4R1M3 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
H2afb2S4R1M3 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
H2afb2S4R1M3 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
H2afb2S4R1M3 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC15.14■□□□□ 0.01
H2afb2S4R1M3 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
H2afb2S4R1M3 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
H2afb2S4R1M3 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
H2afb2S4R1M3 Gm13884-201ENSMUST00000118103 829 ntBASIC15.14■□□□□ 0.01
H2afb2S4R1M3 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
H2afb2S4R1M3 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC15.14■□□□□ 0.01
H2afb2S4R1M3 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
H2afb2S4R1M3 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
H2afb2S4R1M3 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
H2afb2S4R1M3 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
H2afb2S4R1M3 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
H2afb2S4R1M3 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
H2afb2S4R1M3 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
H2afb2S4R1M3 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
H2afb2S4R1M3 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
H2afb2S4R1M3 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
H2afb2S4R1M3 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC15.14■□□□□ 0.01
H2afb2S4R1M3 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
H2afb2S4R1M3 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
H2afb2S4R1M3 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
H2afb2S4R1M3 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
H2afb2S4R1M3 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
H2afb2S4R1M3 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
H2afb2S4R1M3 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC15.13■□□□□ 0.01
H2afb2S4R1M3 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
H2afb2S4R1M3 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
H2afb2S4R1M3 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
H2afb2S4R1M3 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
H2afb2S4R1M3 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
H2afb2S4R1M3 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
H2afb2S4R1M3 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
H2afb2S4R1M3 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC15.13■□□□□ 0.01
H2afb2S4R1M3 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
H2afb2S4R1M3 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
H2afb2S4R1M3 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
H2afb2S4R1M3 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC15.13■□□□□ 0.01
H2afb2S4R1M3 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
H2afb2S4R1M3 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC15.13■□□□□ 0.01
H2afb2S4R1M3 AC147366.1-201ENSMUST00000227671 852 ntBASIC15.13■□□□□ 0.01
H2afb2S4R1M3 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
H2afb2S4R1M3 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
H2afb2S4R1M3 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
H2afb2S4R1M3 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
H2afb2S4R1M3 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
H2afb2S4R1M3 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
H2afb2S4R1M3 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
H2afb2S4R1M3 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
H2afb2S4R1M3 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
H2afb2S4R1M3 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
H2afb2S4R1M3 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
H2afb2S4R1M3 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
H2afb2S4R1M3 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
H2afb2S4R1M3 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC15.12■□□□□ 0.01
H2afb2S4R1M3 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
H2afb2S4R1M3 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
H2afb2S4R1M3 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
H2afb2S4R1M3 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
H2afb2S4R1M3 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
H2afb2S4R1M3 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
H2afb2S4R1M3 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
H2afb2S4R1M3 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC15.12■□□□□ 0.01
H2afb2S4R1M3 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
H2afb2S4R1M3 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
H2afb2S4R1M3 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
H2afb2S4R1M3 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
H2afb2S4R1M3 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
H2afb2S4R1M3 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
H2afb2S4R1M3 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC15.12■□□□□ 0.01
H2afb2S4R1M3 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC15.12■□□□□ 0.01
H2afb2S4R1M3 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC15.12■□□□□ 0.01
H2afb2S4R1M3 AV026068-213ENSMUST00000223675 1171 ntBASIC15.12■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms