Protein–RNA interactions for Protein: Q9Z262

Cldn6, Claudin-6, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn6Q9Z262 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cldn6Q9Z262 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cldn6Q9Z262 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cldn6Q9Z262 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cldn6Q9Z262 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Cldn6Q9Z262 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cldn6Q9Z262 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cldn6Q9Z262 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cldn6Q9Z262 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cldn6Q9Z262 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cldn6Q9Z262 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC14.19□□□□□ -0.14
Cldn6Q9Z262 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cldn6Q9Z262 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cldn6Q9Z262 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Cldn6Q9Z262 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Cldn6Q9Z262 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cldn6Q9Z262 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
Cldn6Q9Z262 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cldn6Q9Z262 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cldn6Q9Z262 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cldn6Q9Z262 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cldn6Q9Z262 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cldn6Q9Z262 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cldn6Q9Z262 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cldn6Q9Z262 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Cldn6Q9Z262 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cldn6Q9Z262 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cldn6Q9Z262 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cldn6Q9Z262 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC14.18□□□□□ -0.14
Cldn6Q9Z262 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC14.18□□□□□ -0.14
Cldn6Q9Z262 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC14.18□□□□□ -0.14
Cldn6Q9Z262 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cldn6Q9Z262 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC14.18□□□□□ -0.14
Cldn6Q9Z262 Gm7787-201ENSMUST00000216858 688 ntBASIC14.18□□□□□ -0.14
Cldn6Q9Z262 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Cldn6Q9Z262 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cldn6Q9Z262 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC14.18□□□□□ -0.14
Cldn6Q9Z262 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cldn6Q9Z262 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC14.18□□□□□ -0.14
Cldn6Q9Z262 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cldn6Q9Z262 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Cldn6Q9Z262 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cldn6Q9Z262 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cldn6Q9Z262 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cldn6Q9Z262 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cldn6Q9Z262 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cldn6Q9Z262 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cldn6Q9Z262 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cldn6Q9Z262 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cldn6Q9Z262 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cldn6Q9Z262 Gm16425-201ENSMUST00000118143 3130 ntBASIC14.17□□□□□ -0.14
Cldn6Q9Z262 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
Cldn6Q9Z262 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cldn6Q9Z262 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cldn6Q9Z262 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Cldn6Q9Z262 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cldn6Q9Z262 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cldn6Q9Z262 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cldn6Q9Z262 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Cldn6Q9Z262 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Cldn6Q9Z262 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
Cldn6Q9Z262 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cldn6Q9Z262 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
Cldn6Q9Z262 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cldn6Q9Z262 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cldn6Q9Z262 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cldn6Q9Z262 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cldn6Q9Z262 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cldn6Q9Z262 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC14.17□□□□□ -0.14
Cldn6Q9Z262 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Cldn6Q9Z262 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cldn6Q9Z262 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Cldn6Q9Z262 Gm45167-201ENSMUST00000208007 322 ntBASIC14.17□□□□□ -0.14
Cldn6Q9Z262 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cldn6Q9Z262 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cldn6Q9Z262 AV026068-213ENSMUST00000223675 1171 ntBASIC14.17□□□□□ -0.14
Cldn6Q9Z262 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cldn6Q9Z262 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Cldn6Q9Z262 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cldn6Q9Z262 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cldn6Q9Z262 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Cldn6Q9Z262 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cldn6Q9Z262 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cldn6Q9Z262 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cldn6Q9Z262 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cldn6Q9Z262 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Cldn6Q9Z262 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cldn6Q9Z262 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cldn6Q9Z262 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cldn6Q9Z262 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cldn6Q9Z262 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cldn6Q9Z262 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cldn6Q9Z262 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cldn6Q9Z262 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cldn6Q9Z262 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cldn6Q9Z262 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cldn6Q9Z262 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cldn6Q9Z262 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC14.16□□□□□ -0.14
Cldn6Q9Z262 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cldn6Q9Z262 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms