Protein–RNA interactions for Protein: Q9R1R0

Lhx6, LIM/homeobox protein Lhx6, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx6Q9R1R0 Gm43452-201ENSMUST00000201873 991 ntBASIC14.37□□□□□ -0.11
Lhx6Q9R1R0 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC14.37□□□□□ -0.11
Lhx6Q9R1R0 Olfr724-202ENSMUST00000213390 1152 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Lhx6Q9R1R0 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Lhx6Q9R1R0 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Lhx6Q9R1R0 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Lhx6Q9R1R0 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Lhx6Q9R1R0 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Lhx6Q9R1R0 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Lhx6Q9R1R0 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
Lhx6Q9R1R0 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Lhx6Q9R1R0 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Lhx6Q9R1R0 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC14.37□□□□□ -0.11
Lhx6Q9R1R0 AC159621.2-201ENSMUST00000223519 1326 ntBASIC14.37□□□□□ -0.11
Lhx6Q9R1R0 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Lhx6Q9R1R0 Gm8839-201ENSMUST00000121279 1645 ntBASIC14.37□□□□□ -0.11
Lhx6Q9R1R0 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Lhx6Q9R1R0 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lhx6Q9R1R0 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lhx6Q9R1R0 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Lhx6Q9R1R0 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lhx6Q9R1R0 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Lhx6Q9R1R0 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lhx6Q9R1R0 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lhx6Q9R1R0 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Lhx6Q9R1R0 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC14.36□□□□□ -0.11
Lhx6Q9R1R0 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lhx6Q9R1R0 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC14.36□□□□□ -0.11
Lhx6Q9R1R0 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lhx6Q9R1R0 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lhx6Q9R1R0 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lhx6Q9R1R0 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lhx6Q9R1R0 Gm13216-201ENSMUST00000117145 591 ntBASIC14.36□□□□□ -0.11
Lhx6Q9R1R0 Dctd-205ENSMUST00000174278 799 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
Lhx6Q9R1R0 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Lhx6Q9R1R0 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lhx6Q9R1R0 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lhx6Q9R1R0 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Lhx6Q9R1R0 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC14.36□□□□□ -0.11
Lhx6Q9R1R0 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC14.36□□□□□ -0.11
Lhx6Q9R1R0 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lhx6Q9R1R0 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Lhx6Q9R1R0 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lhx6Q9R1R0 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Lhx6Q9R1R0 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Lhx6Q9R1R0 Gm42934-201ENSMUST00000196920 1345 ntBASIC14.36□□□□□ -0.11
Lhx6Q9R1R0 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lhx6Q9R1R0 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lhx6Q9R1R0 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Lhx6Q9R1R0 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lhx6Q9R1R0 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lhx6Q9R1R0 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lhx6Q9R1R0 Ptprs-211ENSMUST00000223859 5588 ntBASIC14.35□□□□□ -0.11
Lhx6Q9R1R0 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lhx6Q9R1R0 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lhx6Q9R1R0 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lhx6Q9R1R0 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Lhx6Q9R1R0 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Lhx6Q9R1R0 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lhx6Q9R1R0 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
Lhx6Q9R1R0 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Lhx6Q9R1R0 Gm8349-201ENSMUST00000182720 1003 ntBASIC14.35□□□□□ -0.11
Lhx6Q9R1R0 Gm28180-201ENSMUST00000189608 722 ntBASIC14.35□□□□□ -0.11
Lhx6Q9R1R0 Gm37502-201ENSMUST00000192981 356 ntTSL 2 BASIC14.35□□□□□ -0.11
Lhx6Q9R1R0 Gm8190-201ENSMUST00000199603 586 ntBASIC14.35□□□□□ -0.11
Lhx6Q9R1R0 Gm43550-201ENSMUST00000200597 303 ntBASIC14.35□□□□□ -0.11
Lhx6Q9R1R0 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC14.35□□□□□ -0.11
Lhx6Q9R1R0 Olfr206-202ENSMUST00000207927 1122 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Lhx6Q9R1R0 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC14.35□□□□□ -0.11
Lhx6Q9R1R0 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Lhx6Q9R1R0 Gm36858-201ENSMUST00000194501 2391 ntBASIC14.35□□□□□ -0.11
Lhx6Q9R1R0 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lhx6Q9R1R0 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lhx6Q9R1R0 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lhx6Q9R1R0 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lhx6Q9R1R0 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lhx6Q9R1R0 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lhx6Q9R1R0 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Lhx6Q9R1R0 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Lhx6Q9R1R0 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lhx6Q9R1R0 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lhx6Q9R1R0 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lhx6Q9R1R0 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC14.35□□□□□ -0.11
Lhx6Q9R1R0 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lhx6Q9R1R0 Nrn1-204ENSMUST00000224323 1779 ntBASIC14.34□□□□□ -0.11
Lhx6Q9R1R0 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Lhx6Q9R1R0 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Lhx6Q9R1R0 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lhx6Q9R1R0 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Lhx6Q9R1R0 3110062G12Rik-201ENSMUST00000192113 1419 ntBASIC14.34□□□□□ -0.11
Lhx6Q9R1R0 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC14.34□□□□□ -0.11
Lhx6Q9R1R0 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Lhx6Q9R1R0 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Lhx6Q9R1R0 Vmn1r23-201ENSMUST00000175817 997 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Lhx6Q9R1R0 Gm16434-202ENSMUST00000177712 618 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Lhx6Q9R1R0 Gm6676-202ENSMUST00000178376 618 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Lhx6Q9R1R0 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Lhx6Q9R1R0 Gm27300-201ENSMUST00000184085 97 ntBASIC14.34□□□□□ -0.11
Lhx6Q9R1R0 Gm27335-201ENSMUST00000184758 97 ntBASIC14.34□□□□□ -0.11
Lhx6Q9R1R0 Gm17983-201ENSMUST00000190766 594 ntBASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms