Protein–RNA interactions for Protein: Q9R049

Amfr, E3 ubiquitin-protein ligase AMFR, mousemouse

Predictions only

Length 643 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AmfrQ9R049 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
AmfrQ9R049 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
AmfrQ9R049 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
AmfrQ9R049 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
AmfrQ9R049 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
AmfrQ9R049 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
AmfrQ9R049 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
AmfrQ9R049 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
AmfrQ9R049 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
AmfrQ9R049 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC16.96■□□□□ 0.3
AmfrQ9R049 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
AmfrQ9R049 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.3
AmfrQ9R049 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
AmfrQ9R049 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
AmfrQ9R049 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
AmfrQ9R049 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
AmfrQ9R049 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
AmfrQ9R049 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
AmfrQ9R049 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
AmfrQ9R049 Gm15358-201ENSMUST00000119249 520 ntBASIC16.95■□□□□ 0.3
AmfrQ9R049 Gm8344-201ENSMUST00000119813 856 ntBASIC16.95■□□□□ 0.3
AmfrQ9R049 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
AmfrQ9R049 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC16.95■□□□□ 0.3
AmfrQ9R049 Gm6443-201ENSMUST00000203599 874 ntBASIC16.95■□□□□ 0.3
AmfrQ9R049 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC16.95■□□□□ 0.3
AmfrQ9R049 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC16.95■□□□□ 0.3
AmfrQ9R049 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
AmfrQ9R049 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
AmfrQ9R049 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
AmfrQ9R049 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC16.95■□□□□ 0.3
AmfrQ9R049 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
AmfrQ9R049 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC16.95■□□□□ 0.3
AmfrQ9R049 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
AmfrQ9R049 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
AmfrQ9R049 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
AmfrQ9R049 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
AmfrQ9R049 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
AmfrQ9R049 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
AmfrQ9R049 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
AmfrQ9R049 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC16.94■□□□□ 0.3
AmfrQ9R049 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
AmfrQ9R049 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
AmfrQ9R049 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
AmfrQ9R049 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
AmfrQ9R049 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
AmfrQ9R049 Gm1401-201ENSMUST00000122048 772 ntBASIC16.94■□□□□ 0.3
AmfrQ9R049 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC16.94■□□□□ 0.3
AmfrQ9R049 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC16.94■□□□□ 0.3
AmfrQ9R049 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
AmfrQ9R049 Gm2308-201ENSMUST00000166539 1004 ntBASIC16.94■□□□□ 0.3
AmfrQ9R049 AC138767.1-201ENSMUST00000222661 415 ntBASIC16.94■□□□□ 0.3
AmfrQ9R049 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
AmfrQ9R049 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
AmfrQ9R049 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC16.94■□□□□ 0.3
AmfrQ9R049 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
AmfrQ9R049 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
AmfrQ9R049 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
AmfrQ9R049 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
AmfrQ9R049 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
AmfrQ9R049 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
AmfrQ9R049 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
AmfrQ9R049 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
AmfrQ9R049 Gm37500-201ENSMUST00000192059 1443 ntBASIC16.94■□□□□ 0.3
AmfrQ9R049 AC154527.4-201ENSMUST00000224364 1667 ntBASIC16.94■□□□□ 0.3
AmfrQ9R049 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
AmfrQ9R049 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
AmfrQ9R049 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
AmfrQ9R049 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
AmfrQ9R049 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
AmfrQ9R049 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC16.93■□□□□ 0.3
AmfrQ9R049 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC16.93■□□□□ 0.3
AmfrQ9R049 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
AmfrQ9R049 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
AmfrQ9R049 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC16.93■□□□□ 0.3
AmfrQ9R049 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
AmfrQ9R049 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC16.93■□□□□ 0.3
AmfrQ9R049 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC16.93■□□□□ 0.3
AmfrQ9R049 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
AmfrQ9R049 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC16.93■□□□□ 0.3
AmfrQ9R049 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
AmfrQ9R049 Gm37736-201ENSMUST00000193564 2802 ntBASIC16.93■□□□□ 0.3
AmfrQ9R049 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC16.93■□□□□ 0.3
AmfrQ9R049 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
AmfrQ9R049 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
AmfrQ9R049 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
AmfrQ9R049 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
AmfrQ9R049 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
AmfrQ9R049 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC16.92■□□□□ 0.3
AmfrQ9R049 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
AmfrQ9R049 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
AmfrQ9R049 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
AmfrQ9R049 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
AmfrQ9R049 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
AmfrQ9R049 Grk6-207ENSMUST00000225925 2769 ntBASIC16.92■□□□□ 0.3
AmfrQ9R049 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
AmfrQ9R049 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
AmfrQ9R049 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
AmfrQ9R049 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
AmfrQ9R049 Gm7222-201ENSMUST00000117512 906 ntBASIC16.92■□□□□ 0.3
AmfrQ9R049 Gm11764-201ENSMUST00000120221 623 ntBASIC16.92■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms