Protein–RNA interactions for Protein: Q9QXA7

Trim44, Tripartite motif-containing protein 44, mousemouse

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim44Q9QXA7 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Trim44Q9QXA7 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim44Q9QXA7 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Trim44Q9QXA7 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim44Q9QXA7 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim44Q9QXA7 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim44Q9QXA7 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Trim44Q9QXA7 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Trim44Q9QXA7 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim44Q9QXA7 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Trim44Q9QXA7 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim44Q9QXA7 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Trim44Q9QXA7 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC17.55■□□□□ 0.4
Trim44Q9QXA7 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim44Q9QXA7 AC135637.1-201ENSMUST00000227750 365 ntBASIC17.55■□□□□ 0.4
Trim44Q9QXA7 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim44Q9QXA7 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim44Q9QXA7 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim44Q9QXA7 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim44Q9QXA7 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim44Q9QXA7 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim44Q9QXA7 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim44Q9QXA7 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim44Q9QXA7 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim44Q9QXA7 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim44Q9QXA7 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim44Q9QXA7 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim44Q9QXA7 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim44Q9QXA7 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim44Q9QXA7 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim44Q9QXA7 Gm7712-202ENSMUST00000222331 1510 ntBASIC17.54■□□□□ 0.4
Trim44Q9QXA7 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC17.54■□□□□ 0.4
Trim44Q9QXA7 Il3ra-202ENSMUST00000223589 738 ntBASIC17.54■□□□□ 0.4
Trim44Q9QXA7 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC17.54■□□□□ 0.4
Trim44Q9QXA7 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Trim44Q9QXA7 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim44Q9QXA7 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Trim44Q9QXA7 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Trim44Q9QXA7 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim44Q9QXA7 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim44Q9QXA7 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Trim44Q9QXA7 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim44Q9QXA7 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim44Q9QXA7 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim44Q9QXA7 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim44Q9QXA7 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Trim44Q9QXA7 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim44Q9QXA7 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim44Q9QXA7 Gm9856-201ENSMUST00000217077 2578 ntBASIC17.53■□□□□ 0.4
Trim44Q9QXA7 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Trim44Q9QXA7 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Trim44Q9QXA7 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Trim44Q9QXA7 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim44Q9QXA7 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim44Q9QXA7 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC17.53■□□□□ 0.4
Trim44Q9QXA7 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
Trim44Q9QXA7 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim44Q9QXA7 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC17.53■□□□□ 0.4
Trim44Q9QXA7 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim44Q9QXA7 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim44Q9QXA7 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Trim44Q9QXA7 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim44Q9QXA7 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
Trim44Q9QXA7 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Trim44Q9QXA7 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim44Q9QXA7 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim44Q9QXA7 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim44Q9QXA7 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim44Q9QXA7 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim44Q9QXA7 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim44Q9QXA7 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim44Q9QXA7 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC17.53■□□□□ 0.4
Trim44Q9QXA7 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim44Q9QXA7 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Trim44Q9QXA7 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Trim44Q9QXA7 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trim44Q9QXA7 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Trim44Q9QXA7 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trim44Q9QXA7 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Trim44Q9QXA7 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Trim44Q9QXA7 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trim44Q9QXA7 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.4
Trim44Q9QXA7 AC162938.1-201ENSMUST00000213140 2323 ntBASIC17.52■□□□□ 0.4
Trim44Q9QXA7 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Trim44Q9QXA7 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Trim44Q9QXA7 Gm15378-201ENSMUST00000121894 207 ntBASIC17.52■□□□□ 0.4
Trim44Q9QXA7 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Trim44Q9QXA7 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Trim44Q9QXA7 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC17.52■□□□□ 0.4
Trim44Q9QXA7 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trim44Q9QXA7 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trim44Q9QXA7 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trim44Q9QXA7 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trim44Q9QXA7 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Trim44Q9QXA7 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trim44Q9QXA7 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trim44Q9QXA7 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trim44Q9QXA7 Gm19863-201ENSMUST00000192480 2218 ntBASIC17.52■□□□□ 0.39
Trim44Q9QXA7 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trim44Q9QXA7 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms