Protein–RNA interactions for Protein: Q9QWF0

Chaf1a, Chromatin assembly factor 1 subunit A, mousemouse

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1aQ9QWF0 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Chaf1aQ9QWF0 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC16.99■□□□□ 0.31
Chaf1aQ9QWF0 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Chaf1aQ9QWF0 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Chaf1aQ9QWF0 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Chaf1aQ9QWF0 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Chaf1aQ9QWF0 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Chaf1aQ9QWF0 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Chaf1aQ9QWF0 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
Chaf1aQ9QWF0 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Chaf1aQ9QWF0 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Chaf1aQ9QWF0 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Chaf1aQ9QWF0 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Chaf1aQ9QWF0 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Chaf1aQ9QWF0 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Chaf1aQ9QWF0 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Chaf1aQ9QWF0 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Chaf1aQ9QWF0 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Chaf1aQ9QWF0 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Chaf1aQ9QWF0 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Chaf1aQ9QWF0 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Chaf1aQ9QWF0 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Chaf1aQ9QWF0 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Chaf1aQ9QWF0 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC16.98■□□□□ 0.31
Chaf1aQ9QWF0 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC16.98■□□□□ 0.31
Chaf1aQ9QWF0 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC16.98■□□□□ 0.31
Chaf1aQ9QWF0 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Chaf1aQ9QWF0 Gm9172-201ENSMUST00000212092 954 ntBASIC16.98■□□□□ 0.31
Chaf1aQ9QWF0 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC16.98■□□□□ 0.31
Chaf1aQ9QWF0 AC124569.2-201ENSMUST00000225998 818 ntBASIC16.98■□□□□ 0.31
Chaf1aQ9QWF0 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Chaf1aQ9QWF0 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Chaf1aQ9QWF0 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Chaf1aQ9QWF0 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Chaf1aQ9QWF0 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC16.98■□□□□ 0.31
Chaf1aQ9QWF0 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Chaf1aQ9QWF0 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Chaf1aQ9QWF0 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Chaf1aQ9QWF0 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Chaf1aQ9QWF0 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Chaf1aQ9QWF0 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Chaf1aQ9QWF0 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Chaf1aQ9QWF0 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Chaf1aQ9QWF0 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Chaf1aQ9QWF0 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Chaf1aQ9QWF0 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Chaf1aQ9QWF0 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Chaf1aQ9QWF0 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Chaf1aQ9QWF0 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Chaf1aQ9QWF0 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Chaf1aQ9QWF0 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Chaf1aQ9QWF0 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Chaf1aQ9QWF0 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Chaf1aQ9QWF0 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Chaf1aQ9QWF0 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Chaf1aQ9QWF0 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC16.97■□□□□ 0.31
Chaf1aQ9QWF0 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Chaf1aQ9QWF0 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Chaf1aQ9QWF0 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC16.97■□□□□ 0.31
Chaf1aQ9QWF0 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC16.97■□□□□ 0.31
Chaf1aQ9QWF0 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
Chaf1aQ9QWF0 Gm33142-201ENSMUST00000193913 867 ntBASIC16.97■□□□□ 0.31
Chaf1aQ9QWF0 Cmtm5-203ENSMUST00000227441 610 ntBASIC16.97■□□□□ 0.31
Chaf1aQ9QWF0 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Chaf1aQ9QWF0 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Chaf1aQ9QWF0 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Chaf1aQ9QWF0 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC16.97■□□□□ 0.31
Chaf1aQ9QWF0 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC16.97■□□□□ 0.31
Chaf1aQ9QWF0 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Chaf1aQ9QWF0 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
Chaf1aQ9QWF0 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Chaf1aQ9QWF0 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
Chaf1aQ9QWF0 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
Chaf1aQ9QWF0 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Chaf1aQ9QWF0 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Chaf1aQ9QWF0 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Chaf1aQ9QWF0 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Chaf1aQ9QWF0 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Chaf1aQ9QWF0 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Chaf1aQ9QWF0 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Chaf1aQ9QWF0 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Chaf1aQ9QWF0 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
Chaf1aQ9QWF0 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC16.96■□□□□ 0.31
Chaf1aQ9QWF0 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Chaf1aQ9QWF0 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Chaf1aQ9QWF0 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC16.96■□□□□ 0.31
Chaf1aQ9QWF0 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Chaf1aQ9QWF0 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Chaf1aQ9QWF0 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Chaf1aQ9QWF0 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC16.96■□□□□ 0.31
Chaf1aQ9QWF0 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Chaf1aQ9QWF0 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Chaf1aQ9QWF0 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC16.96■□□□□ 0.3
Chaf1aQ9QWF0 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.3
Chaf1aQ9QWF0 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Chaf1aQ9QWF0 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC16.96■□□□□ 0.3
Chaf1aQ9QWF0 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Chaf1aQ9QWF0 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC16.96■□□□□ 0.3
Chaf1aQ9QWF0 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chaf1aQ9QWF0 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms