Protein–RNA interactions for Protein: Q9QUM7

Msh5, MutS protein homolog 5, mousemouse

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh5Q9QUM7 Gm8369-201ENSMUST00000079855 1374 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Msh5Q9QUM7 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Msh5Q9QUM7 Gm44443-201ENSMUST00000204396 5633 ntBASIC15.59■□□□□ 0.09
Msh5Q9QUM7 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC15.59■□□□□ 0.09
Msh5Q9QUM7 4833412K13Rik-201ENSMUST00000195509 1479 ntBASIC15.59■□□□□ 0.09
Msh5Q9QUM7 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC15.59■□□□□ 0.09
Msh5Q9QUM7 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Msh5Q9QUM7 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Msh5Q9QUM7 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Msh5Q9QUM7 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Msh5Q9QUM7 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Msh5Q9QUM7 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Msh5Q9QUM7 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Msh5Q9QUM7 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Msh5Q9QUM7 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Msh5Q9QUM7 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC15.59■□□□□ 0.09
Msh5Q9QUM7 Gm43244-201ENSMUST00000196994 1285 ntBASIC15.59■□□□□ 0.09
Msh5Q9QUM7 AC154846.1-201ENSMUST00000226278 862 ntBASIC15.59■□□□□ 0.09
Msh5Q9QUM7 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Msh5Q9QUM7 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Msh5Q9QUM7 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Msh5Q9QUM7 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Msh5Q9QUM7 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Msh5Q9QUM7 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Msh5Q9QUM7 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Msh5Q9QUM7 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Msh5Q9QUM7 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Msh5Q9QUM7 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Msh5Q9QUM7 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Msh5Q9QUM7 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Msh5Q9QUM7 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC15.58■□□□□ 0.08
Msh5Q9QUM7 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Msh5Q9QUM7 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Msh5Q9QUM7 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Msh5Q9QUM7 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Msh5Q9QUM7 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Msh5Q9QUM7 Gm15579-201ENSMUST00000141299 757 ntTSL 3 BASIC15.58■□□□□ 0.08
Msh5Q9QUM7 Gm37866-201ENSMUST00000191950 696 ntBASIC15.58■□□□□ 0.08
Msh5Q9QUM7 Gm9723-201ENSMUST00000192100 457 ntBASIC15.58■□□□□ 0.08
Msh5Q9QUM7 Gm43275-201ENSMUST00000202053 1020 ntBASIC15.58■□□□□ 0.08
Msh5Q9QUM7 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Msh5Q9QUM7 AC153512.2-201ENSMUST00000220363 1273 ntTSL 5 BASIC15.58■□□□□ 0.08
Msh5Q9QUM7 Cmtm5-203ENSMUST00000227441 610 ntBASIC15.58■□□□□ 0.08
Msh5Q9QUM7 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Msh5Q9QUM7 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Msh5Q9QUM7 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Msh5Q9QUM7 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Msh5Q9QUM7 Gm13571-201ENSMUST00000124654 1381 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Msh5Q9QUM7 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC15.58■□□□□ 0.08
Msh5Q9QUM7 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Msh5Q9QUM7 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC15.58■□□□□ 0.08
Msh5Q9QUM7 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Msh5Q9QUM7 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Msh5Q9QUM7 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Msh5Q9QUM7 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Msh5Q9QUM7 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Msh5Q9QUM7 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Msh5Q9QUM7 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Msh5Q9QUM7 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Msh5Q9QUM7 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Msh5Q9QUM7 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Msh5Q9QUM7 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Msh5Q9QUM7 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
Msh5Q9QUM7 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
Msh5Q9QUM7 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Msh5Q9QUM7 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Msh5Q9QUM7 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Msh5Q9QUM7 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC15.57■□□□□ 0.08
Msh5Q9QUM7 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
Msh5Q9QUM7 Gm12644-201ENSMUST00000119935 606 ntBASIC15.57■□□□□ 0.08
Msh5Q9QUM7 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC15.57■□□□□ 0.08
Msh5Q9QUM7 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC15.57■□□□□ 0.08
Msh5Q9QUM7 Gm37604-201ENSMUST00000191749 1272 ntBASIC15.57■□□□□ 0.08
Msh5Q9QUM7 Gm37709-201ENSMUST00000195074 600 ntBASIC15.57■□□□□ 0.08
Msh5Q9QUM7 Olfr202-202ENSMUST00000201687 1232 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Msh5Q9QUM7 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Msh5Q9QUM7 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Msh5Q9QUM7 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Msh5Q9QUM7 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Msh5Q9QUM7 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Msh5Q9QUM7 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC15.57■□□□□ 0.08
Msh5Q9QUM7 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Msh5Q9QUM7 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC15.57■□□□□ 0.08
Msh5Q9QUM7 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Msh5Q9QUM7 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Msh5Q9QUM7 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Msh5Q9QUM7 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Msh5Q9QUM7 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC15.57■□□□□ 0.08
Msh5Q9QUM7 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Msh5Q9QUM7 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC15.57■□□□□ 0.08
Msh5Q9QUM7 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Msh5Q9QUM7 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC15.56■□□□□ 0.08
Msh5Q9QUM7 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Msh5Q9QUM7 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Msh5Q9QUM7 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Msh5Q9QUM7 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Msh5Q9QUM7 Gm43352-201ENSMUST00000196419 3065 ntBASIC15.56■□□□□ 0.08
Msh5Q9QUM7 Gtf2h5-202ENSMUST00000100955 879 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Msh5Q9QUM7 Gm16178-201ENSMUST00000129408 677 ntTSL 2 BASIC15.56■□□□□ 0.08
Msh5Q9QUM7 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC15.56■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms