Protein–RNA interactions for Protein: Q9JIS7

Cacna1f, Voltage-dependent L-type calcium channel subunit alpha-1F, mousemouse

Predictions only

Length 1,985 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1fQ9JIS7 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Cacna1fQ9JIS7 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC17.02■□□□□ 0.31
Cacna1fQ9JIS7 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Cacna1fQ9JIS7 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Cacna1fQ9JIS7 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC17.02■□□□□ 0.31
Cacna1fQ9JIS7 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC17.02■□□□□ 0.31
Cacna1fQ9JIS7 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cacna1fQ9JIS7 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cacna1fQ9JIS7 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Cacna1fQ9JIS7 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Cacna1fQ9JIS7 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Cacna1fQ9JIS7 Gm9726-201ENSMUST00000180321 678 ntBASIC17.01■□□□□ 0.31
Cacna1fQ9JIS7 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC17.01■□□□□ 0.31
Cacna1fQ9JIS7 Gm9794-201ENSMUST00000202370 423 ntBASIC17.01■□□□□ 0.31
Cacna1fQ9JIS7 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cacna1fQ9JIS7 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cacna1fQ9JIS7 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Cacna1fQ9JIS7 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cacna1fQ9JIS7 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC17.01■□□□□ 0.31
Cacna1fQ9JIS7 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cacna1fQ9JIS7 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cacna1fQ9JIS7 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC17.01■□□□□ 0.31
Cacna1fQ9JIS7 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cacna1fQ9JIS7 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Cacna1fQ9JIS7 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cacna1fQ9JIS7 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC17■□□□□ 0.31
Cacna1fQ9JIS7 Gm12859-201ENSMUST00000117834 427 ntBASIC17■□□□□ 0.31
Cacna1fQ9JIS7 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cacna1fQ9JIS7 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC17■□□□□ 0.31
Cacna1fQ9JIS7 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC17■□□□□ 0.31
Cacna1fQ9JIS7 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC17■□□□□ 0.31
Cacna1fQ9JIS7 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC17■□□□□ 0.31
Cacna1fQ9JIS7 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC17■□□□□ 0.31
Cacna1fQ9JIS7 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC17■□□□□ 0.31
Cacna1fQ9JIS7 Mir125a-201ENSMUST00000083545 68 ntBASIC17■□□□□ 0.31
Cacna1fQ9JIS7 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cacna1fQ9JIS7 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cacna1fQ9JIS7 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Cacna1fQ9JIS7 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cacna1fQ9JIS7 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cacna1fQ9JIS7 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC17■□□□□ 0.31
Cacna1fQ9JIS7 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC17■□□□□ 0.31
Cacna1fQ9JIS7 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cacna1fQ9JIS7 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cacna1fQ9JIS7 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC17■□□□□ 0.31
Cacna1fQ9JIS7 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC17■□□□□ 0.31
Cacna1fQ9JIS7 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Cacna1fQ9JIS7 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC17■□□□□ 0.31
Cacna1fQ9JIS7 Syt7-204ENSMUST00000223586 1344 ntBASIC17■□□□□ 0.31
Cacna1fQ9JIS7 Syt7-205ENSMUST00000224135 1557 ntBASIC17■□□□□ 0.31
Cacna1fQ9JIS7 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Cacna1fQ9JIS7 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cacna1fQ9JIS7 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cacna1fQ9JIS7 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Cacna1fQ9JIS7 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cacna1fQ9JIS7 Gm43195-201ENSMUST00000200614 2332 ntBASIC16.99■□□□□ 0.31
Cacna1fQ9JIS7 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cacna1fQ9JIS7 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cacna1fQ9JIS7 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC16.99■□□□□ 0.31
Cacna1fQ9JIS7 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC16.99■□□□□ 0.31
Cacna1fQ9JIS7 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC16.99■□□□□ 0.31
Cacna1fQ9JIS7 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cacna1fQ9JIS7 Gm27528-202ENSMUST00000222916 2012 ntBASIC16.99■□□□□ 0.31
Cacna1fQ9JIS7 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC16.99■□□□□ 0.31
Cacna1fQ9JIS7 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cacna1fQ9JIS7 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC16.99■□□□□ 0.31
Cacna1fQ9JIS7 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cacna1fQ9JIS7 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Cacna1fQ9JIS7 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cacna1fQ9JIS7 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cacna1fQ9JIS7 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cacna1fQ9JIS7 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Cacna1fQ9JIS7 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cacna1fQ9JIS7 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC16.98■□□□□ 0.31
Cacna1fQ9JIS7 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC16.98■□□□□ 0.31
Cacna1fQ9JIS7 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Cacna1fQ9JIS7 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Cacna1fQ9JIS7 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cacna1fQ9JIS7 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Cacna1fQ9JIS7 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Cacna1fQ9JIS7 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Cacna1fQ9JIS7 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Cacna1fQ9JIS7 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cacna1fQ9JIS7 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Cacna1fQ9JIS7 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cacna1fQ9JIS7 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cacna1fQ9JIS7 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cacna1fQ9JIS7 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Cacna1fQ9JIS7 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cacna1fQ9JIS7 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC16.98■□□□□ 0.31
Cacna1fQ9JIS7 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Cacna1fQ9JIS7 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cacna1fQ9JIS7 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Cacna1fQ9JIS7 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC16.98■□□□□ 0.31
Cacna1fQ9JIS7 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Cacna1fQ9JIS7 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cacna1fQ9JIS7 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cacna1fQ9JIS7 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Cacna1fQ9JIS7 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Cacna1fQ9JIS7 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms