Protein–RNA interactions for Protein: Q9ET35

Tnfrsf13b, Tumor necrosis factor receptor superfamily member 13B, mousemouse

Predictions only

Length 249 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf13bQ9ET35 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Tnfrsf13bQ9ET35 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC11.93□□□□□ -0.5
Tnfrsf13bQ9ET35 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tnfrsf13bQ9ET35 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC11.93□□□□□ -0.5
Tnfrsf13bQ9ET35 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Tnfrsf13bQ9ET35 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Tnfrsf13bQ9ET35 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tnfrsf13bQ9ET35 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tnfrsf13bQ9ET35 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tnfrsf13bQ9ET35 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Tnfrsf13bQ9ET35 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tnfrsf13bQ9ET35 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Tnfrsf13bQ9ET35 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tnfrsf13bQ9ET35 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tnfrsf13bQ9ET35 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC11.93□□□□□ -0.5
Tnfrsf13bQ9ET35 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tnfrsf13bQ9ET35 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tnfrsf13bQ9ET35 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tnfrsf13bQ9ET35 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Tnfrsf13bQ9ET35 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tnfrsf13bQ9ET35 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tnfrsf13bQ9ET35 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tnfrsf13bQ9ET35 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tnfrsf13bQ9ET35 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tnfrsf13bQ9ET35 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tnfrsf13bQ9ET35 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tnfrsf13bQ9ET35 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tnfrsf13bQ9ET35 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tnfrsf13bQ9ET35 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC11.92□□□□□ -0.5
Tnfrsf13bQ9ET35 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Tnfrsf13bQ9ET35 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC11.92□□□□□ -0.5
Tnfrsf13bQ9ET35 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Tnfrsf13bQ9ET35 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Tnfrsf13bQ9ET35 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tnfrsf13bQ9ET35 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tnfrsf13bQ9ET35 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tnfrsf13bQ9ET35 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tnfrsf13bQ9ET35 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tnfrsf13bQ9ET35 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tnfrsf13bQ9ET35 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tnfrsf13bQ9ET35 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tnfrsf13bQ9ET35 Gm45546-201ENSMUST00000211053 2394 ntBASIC11.92□□□□□ -0.5
Tnfrsf13bQ9ET35 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tnfrsf13bQ9ET35 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Tnfrsf13bQ9ET35 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC11.92□□□□□ -0.5
Tnfrsf13bQ9ET35 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tnfrsf13bQ9ET35 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Tnfrsf13bQ9ET35 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Tnfrsf13bQ9ET35 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Tnfrsf13bQ9ET35 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Tnfrsf13bQ9ET35 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Tnfrsf13bQ9ET35 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Tnfrsf13bQ9ET35 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Tnfrsf13bQ9ET35 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Tnfrsf13bQ9ET35 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Tnfrsf13bQ9ET35 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Tnfrsf13bQ9ET35 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Tnfrsf13bQ9ET35 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Tnfrsf13bQ9ET35 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Tnfrsf13bQ9ET35 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Tnfrsf13bQ9ET35 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Tnfrsf13bQ9ET35 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Tnfrsf13bQ9ET35 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC11.91□□□□□ -0.5
Tnfrsf13bQ9ET35 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Tnfrsf13bQ9ET35 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC11.91□□□□□ -0.5
Tnfrsf13bQ9ET35 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Tnfrsf13bQ9ET35 Ighv6-1-201ENSMUST00000193612 343 ntBASIC11.91□□□□□ -0.5
Tnfrsf13bQ9ET35 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Tnfrsf13bQ9ET35 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC11.91□□□□□ -0.5
Tnfrsf13bQ9ET35 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC11.91□□□□□ -0.5
Tnfrsf13bQ9ET35 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Tnfrsf13bQ9ET35 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Tnfrsf13bQ9ET35 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Tnfrsf13bQ9ET35 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Tnfrsf13bQ9ET35 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Tnfrsf13bQ9ET35 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Tnfrsf13bQ9ET35 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Tnfrsf13bQ9ET35 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Tnfrsf13bQ9ET35 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Tnfrsf13bQ9ET35 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC11.91□□□□□ -0.5
Tnfrsf13bQ9ET35 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC11.91□□□□□ -0.5
Tnfrsf13bQ9ET35 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Tnfrsf13bQ9ET35 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Tnfrsf13bQ9ET35 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tnfrsf13bQ9ET35 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tnfrsf13bQ9ET35 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tnfrsf13bQ9ET35 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tnfrsf13bQ9ET35 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Tnfrsf13bQ9ET35 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Tnfrsf13bQ9ET35 Gm44443-201ENSMUST00000204396 5633 ntBASIC11.9□□□□□ -0.5
Tnfrsf13bQ9ET35 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tnfrsf13bQ9ET35 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
Tnfrsf13bQ9ET35 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
Tnfrsf13bQ9ET35 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Tnfrsf13bQ9ET35 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC11.9□□□□□ -0.5
Tnfrsf13bQ9ET35 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC11.9□□□□□ -0.5
Tnfrsf13bQ9ET35 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tnfrsf13bQ9ET35 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tnfrsf13bQ9ET35 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tnfrsf13bQ9ET35 Mir3081-201ENSMUST00000175305 84 ntBASIC11.9□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms