Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Cdc40Q9DC48 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Cdc40Q9DC48 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cdc40Q9DC48 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cdc40Q9DC48 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Cdc40Q9DC48 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cdc40Q9DC48 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC14.08□□□□□ -0.16
Cdc40Q9DC48 Gm14722-201ENSMUST00000118943 689 ntBASIC14.08□□□□□ -0.16
Cdc40Q9DC48 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
Cdc40Q9DC48 Gm14822-201ENSMUST00000122247 291 ntBASIC14.08□□□□□ -0.16
Cdc40Q9DC48 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Cdc40Q9DC48 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
Cdc40Q9DC48 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cdc40Q9DC48 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC14.08□□□□□ -0.16
Cdc40Q9DC48 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Cdc40Q9DC48 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cdc40Q9DC48 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cdc40Q9DC48 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Cdc40Q9DC48 Gm13337-201ENSMUST00000119183 1594 ntBASIC14.08□□□□□ -0.16
Cdc40Q9DC48 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC14.08□□□□□ -0.16
Cdc40Q9DC48 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Cdc40Q9DC48 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Cdc40Q9DC48 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC14.08□□□□□ -0.16
Cdc40Q9DC48 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cdc40Q9DC48 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cdc40Q9DC48 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cdc40Q9DC48 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cdc40Q9DC48 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cdc40Q9DC48 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cdc40Q9DC48 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cdc40Q9DC48 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cdc40Q9DC48 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cdc40Q9DC48 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cdc40Q9DC48 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
Cdc40Q9DC48 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cdc40Q9DC48 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cdc40Q9DC48 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
Cdc40Q9DC48 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC14.07□□□□□ -0.16
Cdc40Q9DC48 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC14.07□□□□□ -0.16
Cdc40Q9DC48 AC225888.1-201ENSMUST00000227184 728 ntBASIC14.07□□□□□ -0.16
Cdc40Q9DC48 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cdc40Q9DC48 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cdc40Q9DC48 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cdc40Q9DC48 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cdc40Q9DC48 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cdc40Q9DC48 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
Cdc40Q9DC48 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cdc40Q9DC48 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cdc40Q9DC48 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC14.07□□□□□ -0.16
Cdc40Q9DC48 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cdc40Q9DC48 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cdc40Q9DC48 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC14.07□□□□□ -0.16
Cdc40Q9DC48 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Cdc40Q9DC48 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cdc40Q9DC48 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cdc40Q9DC48 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cdc40Q9DC48 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC14.06□□□□□ -0.16
Cdc40Q9DC48 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Cdc40Q9DC48 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cdc40Q9DC48 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cdc40Q9DC48 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Cdc40Q9DC48 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cdc40Q9DC48 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC14.06□□□□□ -0.16
Cdc40Q9DC48 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cdc40Q9DC48 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cdc40Q9DC48 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC14.06□□□□□ -0.16
Cdc40Q9DC48 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC14.06□□□□□ -0.16
Cdc40Q9DC48 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cdc40Q9DC48 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cdc40Q9DC48 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cdc40Q9DC48 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Cdc40Q9DC48 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC14.06□□□□□ -0.16
Cdc40Q9DC48 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Cdc40Q9DC48 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Cdc40Q9DC48 Gm27397-201ENSMUST00000184997 107 ntBASIC14.06□□□□□ -0.16
Cdc40Q9DC48 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC14.06□□□□□ -0.16
Cdc40Q9DC48 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cdc40Q9DC48 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cdc40Q9DC48 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Cdc40Q9DC48 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cdc40Q9DC48 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Cdc40Q9DC48 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Cdc40Q9DC48 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cdc40Q9DC48 AC131586.3-201ENSMUST00000228355 1367 ntBASIC14.06□□□□□ -0.16
Cdc40Q9DC48 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cdc40Q9DC48 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cdc40Q9DC48 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cdc40Q9DC48 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cdc40Q9DC48 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cdc40Q9DC48 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cdc40Q9DC48 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC14.05□□□□□ -0.16
Cdc40Q9DC48 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cdc40Q9DC48 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cdc40Q9DC48 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cdc40Q9DC48 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cdc40Q9DC48 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Cdc40Q9DC48 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cdc40Q9DC48 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cdc40Q9DC48 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC14.05□□□□□ -0.16
Cdc40Q9DC48 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC14.05□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 55.6 ms