Protein–RNA interactions for Protein: Q9D6T1

Tube1, Tubulin epsilon chain, mousemouse

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tube1Q9D6T1 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Tube1Q9D6T1 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Tube1Q9D6T1 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Tube1Q9D6T1 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Tube1Q9D6T1 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Tube1Q9D6T1 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Tube1Q9D6T1 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Tube1Q9D6T1 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Tube1Q9D6T1 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC16.84■□□□□ 0.29
Tube1Q9D6T1 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Tube1Q9D6T1 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC16.84■□□□□ 0.29
Tube1Q9D6T1 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Tube1Q9D6T1 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Tube1Q9D6T1 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Tube1Q9D6T1 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC16.83■□□□□ 0.29
Tube1Q9D6T1 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.29
Tube1Q9D6T1 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Tube1Q9D6T1 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Tube1Q9D6T1 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC16.83■□□□□ 0.28
Tube1Q9D6T1 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Tube1Q9D6T1 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC16.83■□□□□ 0.28
Tube1Q9D6T1 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC16.83■□□□□ 0.28
Tube1Q9D6T1 Gm44945-201ENSMUST00000206764 1187 ntBASIC16.83■□□□□ 0.28
Tube1Q9D6T1 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC16.83■□□□□ 0.28
Tube1Q9D6T1 AC127302.2-201ENSMUST00000215212 268 ntBASIC16.83■□□□□ 0.28
Tube1Q9D6T1 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Tube1Q9D6T1 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
Tube1Q9D6T1 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Tube1Q9D6T1 AC158538.2-201ENSMUST00000225455 906 ntBASIC16.83■□□□□ 0.28
Tube1Q9D6T1 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Tube1Q9D6T1 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Tube1Q9D6T1 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Tube1Q9D6T1 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Tube1Q9D6T1 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Tube1Q9D6T1 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Tube1Q9D6T1 Gm29340-201ENSMUST00000188763 3854 ntBASIC16.83■□□□□ 0.28
Tube1Q9D6T1 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Tube1Q9D6T1 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Tube1Q9D6T1 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Tube1Q9D6T1 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Tube1Q9D6T1 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Tube1Q9D6T1 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Tube1Q9D6T1 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tube1Q9D6T1 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Tube1Q9D6T1 Prkcz2-201ENSMUST00000206136 1756 ntBASIC16.82■□□□□ 0.28
Tube1Q9D6T1 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tube1Q9D6T1 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tube1Q9D6T1 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tube1Q9D6T1 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tube1Q9D6T1 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC16.82■□□□□ 0.28
Tube1Q9D6T1 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tube1Q9D6T1 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Tube1Q9D6T1 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Tube1Q9D6T1 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tube1Q9D6T1 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tube1Q9D6T1 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC16.82■□□□□ 0.28
Tube1Q9D6T1 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Tube1Q9D6T1 Ndufaf2-202ENSMUST00000223734 556 ntBASIC16.82■□□□□ 0.28
Tube1Q9D6T1 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tube1Q9D6T1 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tube1Q9D6T1 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tube1Q9D6T1 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tube1Q9D6T1 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Tube1Q9D6T1 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tube1Q9D6T1 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tube1Q9D6T1 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tube1Q9D6T1 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tube1Q9D6T1 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Tube1Q9D6T1 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC16.82■□□□□ 0.28
Tube1Q9D6T1 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tube1Q9D6T1 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Tube1Q9D6T1 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
Tube1Q9D6T1 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC16.81■□□□□ 0.28
Tube1Q9D6T1 Best4-ps-201ENSMUST00000129783 1380 ntBASIC16.81■□□□□ 0.28
Tube1Q9D6T1 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tube1Q9D6T1 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC16.81■□□□□ 0.28
Tube1Q9D6T1 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Tube1Q9D6T1 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tube1Q9D6T1 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tube1Q9D6T1 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Tube1Q9D6T1 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC16.81■□□□□ 0.28
Tube1Q9D6T1 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tube1Q9D6T1 Gm4913-201ENSMUST00000117075 1290 ntBASIC16.81■□□□□ 0.28
Tube1Q9D6T1 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC16.81■□□□□ 0.28
Tube1Q9D6T1 H2af-ps-201ENSMUST00000119066 295 ntBASIC16.81■□□□□ 0.28
Tube1Q9D6T1 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Tube1Q9D6T1 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tube1Q9D6T1 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC16.81■□□□□ 0.28
Tube1Q9D6T1 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Tube1Q9D6T1 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tube1Q9D6T1 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tube1Q9D6T1 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tube1Q9D6T1 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Tube1Q9D6T1 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tube1Q9D6T1 Gm5648-201ENSMUST00000122244 1587 ntBASIC16.81■□□□□ 0.28
Tube1Q9D6T1 Gm37912-201ENSMUST00000191895 3076 ntBASIC16.81■□□□□ 0.28
Tube1Q9D6T1 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Tube1Q9D6T1 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Tube1Q9D6T1 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tube1Q9D6T1 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms