Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
Smc3Q9CW03 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC17.83■□□□□ 0.44
Smc3Q9CW03 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Smc3Q9CW03 Gm10605-202ENSMUST00000183019 3198 ntBASIC17.83■□□□□ 0.44
Smc3Q9CW03 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Smc3Q9CW03 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC17.83■□□□□ 0.44
Smc3Q9CW03 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC17.83■□□□□ 0.44
Smc3Q9CW03 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Smc3Q9CW03 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Smc3Q9CW03 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Smc3Q9CW03 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Smc3Q9CW03 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC17.82■□□□□ 0.44
Smc3Q9CW03 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Smc3Q9CW03 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Smc3Q9CW03 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC17.82■□□□□ 0.44
Smc3Q9CW03 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC17.82■□□□□ 0.44
Smc3Q9CW03 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Smc3Q9CW03 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Smc3Q9CW03 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC17.82■□□□□ 0.44
Smc3Q9CW03 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Smc3Q9CW03 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Smc3Q9CW03 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Smc3Q9CW03 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Smc3Q9CW03 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC17.82■□□□□ 0.44
Smc3Q9CW03 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC17.82■□□□□ 0.44
Smc3Q9CW03 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC17.82■□□□□ 0.44
Smc3Q9CW03 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC17.82■□□□□ 0.44
Smc3Q9CW03 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
Smc3Q9CW03 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC17.82■□□□□ 0.44
Smc3Q9CW03 AC158538.1-201ENSMUST00000225870 294 ntBASIC17.82■□□□□ 0.44
Smc3Q9CW03 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Smc3Q9CW03 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Smc3Q9CW03 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Smc3Q9CW03 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Smc3Q9CW03 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Smc3Q9CW03 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC17.82■□□□□ 0.44
Smc3Q9CW03 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC17.82■□□□□ 0.44
Smc3Q9CW03 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Smc3Q9CW03 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Smc3Q9CW03 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Smc3Q9CW03 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Smc3Q9CW03 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Smc3Q9CW03 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC17.82■□□□□ 0.44
Smc3Q9CW03 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Smc3Q9CW03 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Smc3Q9CW03 Gm10676-201ENSMUST00000098778 3221 ntBASIC17.81■□□□□ 0.44
Smc3Q9CW03 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
Smc3Q9CW03 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Smc3Q9CW03 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Smc3Q9CW03 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Smc3Q9CW03 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Smc3Q9CW03 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC17.81■□□□□ 0.44
Smc3Q9CW03 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Smc3Q9CW03 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Smc3Q9CW03 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Smc3Q9CW03 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Smc3Q9CW03 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Smc3Q9CW03 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Smc3Q9CW03 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC17.81■□□□□ 0.44
Smc3Q9CW03 Gm14859-201ENSMUST00000117752 357 ntBASIC17.81■□□□□ 0.44
Smc3Q9CW03 Gm12644-201ENSMUST00000119935 606 ntBASIC17.81■□□□□ 0.44
Smc3Q9CW03 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Smc3Q9CW03 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC17.81■□□□□ 0.44
Smc3Q9CW03 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC17.81■□□□□ 0.44
Smc3Q9CW03 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Smc3Q9CW03 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Smc3Q9CW03 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Smc3Q9CW03 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Smc3Q9CW03 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Smc3Q9CW03 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Smc3Q9CW03 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Smc3Q9CW03 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC17.81■□□□□ 0.44
Smc3Q9CW03 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Smc3Q9CW03 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Smc3Q9CW03 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Smc3Q9CW03 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Smc3Q9CW03 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Smc3Q9CW03 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Smc3Q9CW03 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Smc3Q9CW03 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Smc3Q9CW03 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Smc3Q9CW03 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Smc3Q9CW03 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Smc3Q9CW03 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Smc3Q9CW03 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Smc3Q9CW03 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
Smc3Q9CW03 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Smc3Q9CW03 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Smc3Q9CW03 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Smc3Q9CW03 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Smc3Q9CW03 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Smc3Q9CW03 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Smc3Q9CW03 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Smc3Q9CW03 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Smc3Q9CW03 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Smc3Q9CW03 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Smc3Q9CW03 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Smc3Q9CW03 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Smc3Q9CW03 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Smc3Q9CW03 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms