Protein–RNA interactions for Protein: Q9CQE8

RTRAF, RNA transcription, translation and transport factor protein, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTRAFQ9CQE8 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC12.35□□□□□ -0.43
RTRAFQ9CQE8 Gm11539-201ENSMUST00000119837 557 ntBASIC12.35□□□□□ -0.43
RTRAFQ9CQE8 Gm12441-201ENSMUST00000121806 588 ntBASIC12.35□□□□□ -0.43
RTRAFQ9CQE8 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
RTRAFQ9CQE8 Gm10698-201ENSMUST00000182663 604 ntBASIC12.35□□□□□ -0.43
RTRAFQ9CQE8 Gm16042-201ENSMUST00000204813 1247 ntBASIC12.35□□□□□ -0.43
RTRAFQ9CQE8 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC12.35□□□□□ -0.43
RTRAFQ9CQE8 AC156016.1-201ENSMUST00000227190 1035 ntBASIC12.35□□□□□ -0.43
RTRAFQ9CQE8 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
RTRAFQ9CQE8 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
RTRAFQ9CQE8 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
RTRAFQ9CQE8 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
RTRAFQ9CQE8 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
RTRAFQ9CQE8 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RTRAFQ9CQE8 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
RTRAFQ9CQE8 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RTRAFQ9CQE8 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
RTRAFQ9CQE8 CT025610.1-201ENSMUST00000224552 1786 ntBASIC12.35□□□□□ -0.43
RTRAFQ9CQE8 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
RTRAFQ9CQE8 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC12.35□□□□□ -0.43
RTRAFQ9CQE8 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RTRAFQ9CQE8 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RTRAFQ9CQE8 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RTRAFQ9CQE8 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RTRAFQ9CQE8 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
RTRAFQ9CQE8 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
RTRAFQ9CQE8 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RTRAFQ9CQE8 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
RTRAFQ9CQE8 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC12.35□□□□□ -0.43
RTRAFQ9CQE8 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RTRAFQ9CQE8 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
RTRAFQ9CQE8 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
RTRAFQ9CQE8 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
RTRAFQ9CQE8 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC12.34□□□□□ -0.43
RTRAFQ9CQE8 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
RTRAFQ9CQE8 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
RTRAFQ9CQE8 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
RTRAFQ9CQE8 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC12.34□□□□□ -0.43
RTRAFQ9CQE8 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
RTRAFQ9CQE8 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
RTRAFQ9CQE8 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
RTRAFQ9CQE8 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
RTRAFQ9CQE8 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
RTRAFQ9CQE8 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
RTRAFQ9CQE8 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
RTRAFQ9CQE8 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
RTRAFQ9CQE8 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
RTRAFQ9CQE8 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
RTRAFQ9CQE8 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC12.34□□□□□ -0.43
RTRAFQ9CQE8 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC12.34□□□□□ -0.43
RTRAFQ9CQE8 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
RTRAFQ9CQE8 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
RTRAFQ9CQE8 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
RTRAFQ9CQE8 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
RTRAFQ9CQE8 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
RTRAFQ9CQE8 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
RTRAFQ9CQE8 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
RTRAFQ9CQE8 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
RTRAFQ9CQE8 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
RTRAFQ9CQE8 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
RTRAFQ9CQE8 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
RTRAFQ9CQE8 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
RTRAFQ9CQE8 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
RTRAFQ9CQE8 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
RTRAFQ9CQE8 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
RTRAFQ9CQE8 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
RTRAFQ9CQE8 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.43
RTRAFQ9CQE8 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.43
RTRAFQ9CQE8 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
RTRAFQ9CQE8 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC12.33□□□□□ -0.44
RTRAFQ9CQE8 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
RTRAFQ9CQE8 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
RTRAFQ9CQE8 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
RTRAFQ9CQE8 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
RTRAFQ9CQE8 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
RTRAFQ9CQE8 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
RTRAFQ9CQE8 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
RTRAFQ9CQE8 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC12.33□□□□□ -0.44
RTRAFQ9CQE8 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
RTRAFQ9CQE8 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC12.33□□□□□ -0.44
RTRAFQ9CQE8 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC12.33□□□□□ -0.44
RTRAFQ9CQE8 Gm6257-201ENSMUST00000163864 910 ntBASIC12.33□□□□□ -0.44
RTRAFQ9CQE8 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC12.33□□□□□ -0.44
RTRAFQ9CQE8 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC12.33□□□□□ -0.44
RTRAFQ9CQE8 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC12.33□□□□□ -0.44
RTRAFQ9CQE8 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC12.33□□□□□ -0.44
RTRAFQ9CQE8 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
RTRAFQ9CQE8 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
RTRAFQ9CQE8 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
RTRAFQ9CQE8 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
RTRAFQ9CQE8 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC12.33□□□□□ -0.44
RTRAFQ9CQE8 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
RTRAFQ9CQE8 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
RTRAFQ9CQE8 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
RTRAFQ9CQE8 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
RTRAFQ9CQE8 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
RTRAFQ9CQE8 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
RTRAFQ9CQE8 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
RTRAFQ9CQE8 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
RTRAFQ9CQE8 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms