Protein–RNA interactions for Protein: Q9CQC3

Protein C9orf135 homolog, mousemouse

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9CQC3 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Q9CQC3 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Q9CQC3 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Q9CQC3 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Q9CQC3 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
Q9CQC3 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC15.7■□□□□ 0.1
Q9CQC3 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Q9CQC3 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC15.7■□□□□ 0.1
Q9CQC3 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Q9CQC3 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Q9CQC3 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Q9CQC3 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Q9CQC3 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Q9CQC3 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Q9CQC3 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC15.7■□□□□ 0.1
Q9CQC3 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
Q9CQC3 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Q9CQC3 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Q9CQC3 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC15.69■□□□□ 0.1
Q9CQC3 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Q9CQC3 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Q9CQC3 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Q9CQC3 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Q9CQC3 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Q9CQC3 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC15.69■□□□□ 0.1
Q9CQC3 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Q9CQC3 Camk2g-217ENSMUST00000226630 1937 ntBASIC15.69■□□□□ 0.1
Q9CQC3 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Q9CQC3 AC138767.1-201ENSMUST00000222661 415 ntBASIC15.69■□□□□ 0.1
Q9CQC3 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Q9CQC3 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Q9CQC3 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Q9CQC3 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Q9CQC3 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Q9CQC3 Gm37728-201ENSMUST00000195025 2292 ntBASIC15.69■□□□□ 0.1
Q9CQC3 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Q9CQC3 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Q9CQC3 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Q9CQC3 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Q9CQC3 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Q9CQC3 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
Q9CQC3 AC025913.2-201ENSMUST00000220136 1766 ntBASIC15.68■□□□□ 0.1
Q9CQC3 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Q9CQC3 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC15.68■□□□□ 0.1
Q9CQC3 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC15.68■□□□□ 0.1
Q9CQC3 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Q9CQC3 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Q9CQC3 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Q9CQC3 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Q9CQC3 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Q9CQC3 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Q9CQC3 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Q9CQC3 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC15.68■□□□□ 0.1
Q9CQC3 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Q9CQC3 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Q9CQC3 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Q9CQC3 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Q9CQC3 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Q9CQC3 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Q9CQC3 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Q9CQC3 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC15.67■□□□□ 0.1
Q9CQC3 Gm21009-201ENSMUST00000197169 1669 ntBASIC15.67■□□□□ 0.1
Q9CQC3 Gm29340-201ENSMUST00000188763 3854 ntBASIC15.67■□□□□ 0.1
Q9CQC3 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
Q9CQC3 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Q9CQC3 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC15.67■□□□□ 0.1
Q9CQC3 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC15.67■□□□□ 0.1
Q9CQC3 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Q9CQC3 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Q9CQC3 Gm18733-201ENSMUST00000173950 856 ntBASIC15.67■□□□□ 0.1
Q9CQC3 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Q9CQC3 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC15.67■□□□□ 0.1
Q9CQC3 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC15.67■□□□□ 0.1
Q9CQC3 CT010506.4-201ENSMUST00000225457 351 ntBASIC15.67■□□□□ 0.1
Q9CQC3 Gm7461-201ENSMUST00000058918 827 ntBASIC15.67■□□□□ 0.1
Q9CQC3 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Q9CQC3 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Q9CQC3 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Q9CQC3 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC15.67■□□□□ 0.1
Q9CQC3 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Q9CQC3 Gm11960-202ENSMUST00000181063 2858 ntBASIC15.67■□□□□ 0.1
Q9CQC3 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
Q9CQC3 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Q9CQC3 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Q9CQC3 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Q9CQC3 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Q9CQC3 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Q9CQC3 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Q9CQC3 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Q9CQC3 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Q9CQC3 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Q9CQC3 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Q9CQC3 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Q9CQC3 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Q9CQC3 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Q9CQC3 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
Q9CQC3 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Q9CQC3 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Q9CQC3 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Q9CQC3 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 52.1 ms