Protein–RNA interactions for Protein: Q9CQ70

H2afb1, Histone H2A-Bbd type 1, mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1Q9CQ70 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
H2afb1Q9CQ70 Gm10355-201ENSMUST00000097146 517 ntBASIC12.41□□□□□ -0.42
H2afb1Q9CQ70 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
H2afb1Q9CQ70 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
H2afb1Q9CQ70 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
H2afb1Q9CQ70 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
H2afb1Q9CQ70 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
H2afb1Q9CQ70 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
H2afb1Q9CQ70 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
H2afb1Q9CQ70 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
H2afb1Q9CQ70 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC12.41□□□□□ -0.42
H2afb1Q9CQ70 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC12.41□□□□□ -0.42
H2afb1Q9CQ70 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
H2afb1Q9CQ70 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
H2afb1Q9CQ70 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
H2afb1Q9CQ70 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
H2afb1Q9CQ70 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
H2afb1Q9CQ70 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
H2afb1Q9CQ70 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
H2afb1Q9CQ70 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
H2afb1Q9CQ70 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
H2afb1Q9CQ70 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
H2afb1Q9CQ70 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
H2afb1Q9CQ70 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC12.4□□□□□ -0.42
H2afb1Q9CQ70 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
H2afb1Q9CQ70 Celf4-206ENSMUST00000224553 1729 ntBASIC12.4□□□□□ -0.42
H2afb1Q9CQ70 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
H2afb1Q9CQ70 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
H2afb1Q9CQ70 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
H2afb1Q9CQ70 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
H2afb1Q9CQ70 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC12.4□□□□□ -0.42
H2afb1Q9CQ70 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
H2afb1Q9CQ70 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
H2afb1Q9CQ70 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC12.4□□□□□ -0.42
H2afb1Q9CQ70 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
H2afb1Q9CQ70 Gm11780-201ENSMUST00000136880 516 ntBASIC12.4□□□□□ -0.42
H2afb1Q9CQ70 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC12.4□□□□□ -0.42
H2afb1Q9CQ70 Gm27646-201ENSMUST00000183989 110 ntBASIC12.4□□□□□ -0.42
H2afb1Q9CQ70 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
H2afb1Q9CQ70 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC12.4□□□□□ -0.42
H2afb1Q9CQ70 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
H2afb1Q9CQ70 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
H2afb1Q9CQ70 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
H2afb1Q9CQ70 Gm9768-201ENSMUST00000206007 2861 ntBASIC12.4□□□□□ -0.42
H2afb1Q9CQ70 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
H2afb1Q9CQ70 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
H2afb1Q9CQ70 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
H2afb1Q9CQ70 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
H2afb1Q9CQ70 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
H2afb1Q9CQ70 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
H2afb1Q9CQ70 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
H2afb1Q9CQ70 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.43
H2afb1Q9CQ70 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC12.4□□□□□ -0.43
H2afb1Q9CQ70 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC12.4□□□□□ -0.43
H2afb1Q9CQ70 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC12.4□□□□□ -0.43
H2afb1Q9CQ70 Gm16425-201ENSMUST00000118143 3130 ntBASIC12.4□□□□□ -0.43
H2afb1Q9CQ70 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC12.39□□□□□ -0.43
H2afb1Q9CQ70 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
H2afb1Q9CQ70 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
H2afb1Q9CQ70 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
H2afb1Q9CQ70 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
H2afb1Q9CQ70 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
H2afb1Q9CQ70 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
H2afb1Q9CQ70 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC12.39□□□□□ -0.43
H2afb1Q9CQ70 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
H2afb1Q9CQ70 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
H2afb1Q9CQ70 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
H2afb1Q9CQ70 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
H2afb1Q9CQ70 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
H2afb1Q9CQ70 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
H2afb1Q9CQ70 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC12.39□□□□□ -0.43
H2afb1Q9CQ70 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC12.39□□□□□ -0.43
H2afb1Q9CQ70 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
H2afb1Q9CQ70 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
H2afb1Q9CQ70 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
H2afb1Q9CQ70 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
H2afb1Q9CQ70 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC12.39□□□□□ -0.43
H2afb1Q9CQ70 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
H2afb1Q9CQ70 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
H2afb1Q9CQ70 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
H2afb1Q9CQ70 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
H2afb1Q9CQ70 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC12.39□□□□□ -0.43
H2afb1Q9CQ70 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
H2afb1Q9CQ70 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
H2afb1Q9CQ70 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
H2afb1Q9CQ70 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
H2afb1Q9CQ70 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
H2afb1Q9CQ70 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
H2afb1Q9CQ70 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
H2afb1Q9CQ70 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
H2afb1Q9CQ70 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
H2afb1Q9CQ70 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
H2afb1Q9CQ70 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
H2afb1Q9CQ70 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
H2afb1Q9CQ70 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
H2afb1Q9CQ70 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
H2afb1Q9CQ70 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
H2afb1Q9CQ70 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
H2afb1Q9CQ70 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC12.38□□□□□ -0.43
H2afb1Q9CQ70 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms