Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Trim33Q99PP7 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Trim33Q99PP7 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC15.03■□□□□ -0
Trim33Q99PP7 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trim33Q99PP7 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC15.03■□□□□ -0
Trim33Q99PP7 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trim33Q99PP7 AV026068-213ENSMUST00000223675 1171 ntBASIC15.03■□□□□ -0
Trim33Q99PP7 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Trim33Q99PP7 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim33Q99PP7 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim33Q99PP7 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
Trim33Q99PP7 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim33Q99PP7 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trim33Q99PP7 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim33Q99PP7 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim33Q99PP7 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Trim33Q99PP7 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim33Q99PP7 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trim33Q99PP7 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC15.02■□□□□ -0
Trim33Q99PP7 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trim33Q99PP7 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC15.02■□□□□ -0
Trim33Q99PP7 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Trim33Q99PP7 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trim33Q99PP7 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Trim33Q99PP7 Gm11185-201ENSMUST00000117732 1007 ntBASIC15.02■□□□□ -0
Trim33Q99PP7 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC15.02■□□□□ -0
Trim33Q99PP7 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Trim33Q99PP7 Gm37153-201ENSMUST00000193637 231 ntBASIC15.02■□□□□ -0
Trim33Q99PP7 Gm2651-201ENSMUST00000203560 838 ntBASIC15.02■□□□□ -0
Trim33Q99PP7 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC15.02■□□□□ -0
Trim33Q99PP7 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trim33Q99PP7 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trim33Q99PP7 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC15.02■□□□□ -0
Trim33Q99PP7 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trim33Q99PP7 Gm43352-201ENSMUST00000196419 3065 ntBASIC15.02□□□□□ -0.01
Trim33Q99PP7 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trim33Q99PP7 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC15.02□□□□□ -0.01
Trim33Q99PP7 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trim33Q99PP7 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trim33Q99PP7 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trim33Q99PP7 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim33Q99PP7 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Trim33Q99PP7 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim33Q99PP7 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim33Q99PP7 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim33Q99PP7 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trim33Q99PP7 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
Trim33Q99PP7 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim33Q99PP7 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim33Q99PP7 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim33Q99PP7 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Trim33Q99PP7 Mir5126-201ENSMUST00000175513 77 ntBASIC15.01□□□□□ -0.01
Trim33Q99PP7 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim33Q99PP7 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim33Q99PP7 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim33Q99PP7 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim33Q99PP7 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC15.01□□□□□ -0.01
Trim33Q99PP7 Asic1-205ENSMUST00000228185 1818 ntBASIC15.01□□□□□ -0.01
Trim33Q99PP7 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim33Q99PP7 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim33Q99PP7 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim33Q99PP7 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim33Q99PP7 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim33Q99PP7 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim33Q99PP7 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim33Q99PP7 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim33Q99PP7 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Trim33Q99PP7 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC15□□□□□ -0.01
Trim33Q99PP7 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC15□□□□□ -0.01
Trim33Q99PP7 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim33Q99PP7 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trim33Q99PP7 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Trim33Q99PP7 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Trim33Q99PP7 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Trim33Q99PP7 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim33Q99PP7 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim33Q99PP7 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trim33Q99PP7 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trim33Q99PP7 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC15□□□□□ -0.01
Trim33Q99PP7 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC15□□□□□ -0.01
Trim33Q99PP7 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC15□□□□□ -0.01
Trim33Q99PP7 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim33Q99PP7 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Trim33Q99PP7 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC15□□□□□ -0.01
Trim33Q99PP7 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC15□□□□□ -0.01
Trim33Q99PP7 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim33Q99PP7 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim33Q99PP7 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim33Q99PP7 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC15□□□□□ -0.01
Trim33Q99PP7 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim33Q99PP7 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trim33Q99PP7 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Trim33Q99PP7 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim33Q99PP7 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC15□□□□□ -0.01
Trim33Q99PP7 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trim33Q99PP7 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim33Q99PP7 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC14.99□□□□□ -0.01
Trim33Q99PP7 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim33Q99PP7 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim33Q99PP7 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms