Protein–RNA interactions for Protein: Q99P72

Rtn4, Reticulon-4, mousemouse

Known RBP Predictions only

Length 1,162 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4Q99P72 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rtn4Q99P72 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rtn4Q99P72 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
Rtn4Q99P72 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC19.42■□□□□ 0.7
Rtn4Q99P72 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC19.42■□□□□ 0.7
Rtn4Q99P72 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Rtn4Q99P72 Gm6736-201ENSMUST00000166583 948 ntBASIC19.42■□□□□ 0.7
Rtn4Q99P72 Csnk1a1-208ENSMUST00000167187 1222 ntTSL 5 BASIC19.42■□□□□ 0.7
Rtn4Q99P72 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC19.42■□□□□ 0.7
Rtn4Q99P72 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Rtn4Q99P72 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC19.42■□□□□ 0.7
Rtn4Q99P72 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC19.42■□□□□ 0.7
Rtn4Q99P72 Gm43575-201ENSMUST00000196420 516 ntBASIC19.42■□□□□ 0.7
Rtn4Q99P72 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC19.42■□□□□ 0.7
Rtn4Q99P72 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Rtn4Q99P72 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rtn4Q99P72 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Rtn4Q99P72 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Rtn4Q99P72 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Rtn4Q99P72 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rtn4Q99P72 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rtn4Q99P72 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Rtn4Q99P72 Gm42535-201ENSMUST00000197312 1399 ntBASIC19.42■□□□□ 0.7
Rtn4Q99P72 EU599041-202ENSMUST00000205291 1386 ntTSL 5 BASIC19.42■□□□□ 0.7
Rtn4Q99P72 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rtn4Q99P72 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rtn4Q99P72 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rtn4Q99P72 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rtn4Q99P72 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rtn4Q99P72 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rtn4Q99P72 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rtn4Q99P72 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rtn4Q99P72 AC154412.1-201ENSMUST00000226540 2786 ntBASIC19.41■□□□□ 0.7
Rtn4Q99P72 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Rtn4Q99P72 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rtn4Q99P72 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Rtn4Q99P72 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Rtn4Q99P72 Gm15171-201ENSMUST00000122191 334 ntBASIC19.41■□□□□ 0.7
Rtn4Q99P72 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rtn4Q99P72 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC19.41■□□□□ 0.7
Rtn4Q99P72 Gm19395-201ENSMUST00000219618 646 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Rtn4Q99P72 AC225888.1-201ENSMUST00000227184 728 ntBASIC19.41■□□□□ 0.7
Rtn4Q99P72 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rtn4Q99P72 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rtn4Q99P72 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rtn4Q99P72 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rtn4Q99P72 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Rtn4Q99P72 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rtn4Q99P72 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Rtn4Q99P72 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rtn4Q99P72 AC131586.3-201ENSMUST00000228355 1367 ntBASIC19.41■□□□□ 0.7
Rtn4Q99P72 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Rtn4Q99P72 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Rtn4Q99P72 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rtn4Q99P72 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Rtn4Q99P72 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Rtn4Q99P72 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rtn4Q99P72 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rtn4Q99P72 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rtn4Q99P72 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rtn4Q99P72 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC19.4■□□□□ 0.7
Rtn4Q99P72 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC19.4■□□□□ 0.7
Rtn4Q99P72 Gm37612-201ENSMUST00000193626 582 ntTSL 5 BASIC19.4■□□□□ 0.7
Rtn4Q99P72 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC19.4■□□□□ 0.7
Rtn4Q99P72 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rtn4Q99P72 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rtn4Q99P72 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rtn4Q99P72 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rtn4Q99P72 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rtn4Q99P72 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Rtn4Q99P72 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rtn4Q99P72 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rtn4Q99P72 Gm16425-201ENSMUST00000118143 3130 ntBASIC19.4■□□□□ 0.7
Rtn4Q99P72 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC19.39■□□□□ 0.69
Rtn4Q99P72 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
Rtn4Q99P72 Gm10605-202ENSMUST00000183019 3198 ntBASIC19.39■□□□□ 0.69
Rtn4Q99P72 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rtn4Q99P72 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rtn4Q99P72 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Rtn4Q99P72 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rtn4Q99P72 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rtn4Q99P72 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Rtn4Q99P72 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Rtn4Q99P72 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rtn4Q99P72 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rtn4Q99P72 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC19.39■□□□□ 0.69
Rtn4Q99P72 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC19.39■□□□□ 0.69
Rtn4Q99P72 4930550C14Rik-204ENSMUST00000217318 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rtn4Q99P72 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rtn4Q99P72 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rtn4Q99P72 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rtn4Q99P72 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC19.39■□□□□ 0.69
Rtn4Q99P72 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC19.39■□□□□ 0.69
Rtn4Q99P72 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rtn4Q99P72 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rtn4Q99P72 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Rtn4Q99P72 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rtn4Q99P72 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
Rtn4Q99P72 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rtn4Q99P72 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms