Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Col25a1Q99MQ5 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Col25a1Q99MQ5 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Col25a1Q99MQ5 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col25a1Q99MQ5 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col25a1Q99MQ5 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col25a1Q99MQ5 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col25a1Q99MQ5 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col25a1Q99MQ5 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col25a1Q99MQ5 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
Col25a1Q99MQ5 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Col25a1Q99MQ5 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Col25a1Q99MQ5 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC15.65■□□□□ 0.1
Col25a1Q99MQ5 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Col25a1Q99MQ5 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC15.65■□□□□ 0.1
Col25a1Q99MQ5 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC15.65■□□□□ 0.1
Col25a1Q99MQ5 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC15.65■□□□□ 0.1
Col25a1Q99MQ5 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Col25a1Q99MQ5 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC15.65■□□□□ 0.1
Col25a1Q99MQ5 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
Col25a1Q99MQ5 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC15.65■□□□□ 0.1
Col25a1Q99MQ5 Gm37466-201ENSMUST00000195692 652 ntBASIC15.65■□□□□ 0.1
Col25a1Q99MQ5 Gm18246-201ENSMUST00000221023 728 ntBASIC15.65■□□□□ 0.1
Col25a1Q99MQ5 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col25a1Q99MQ5 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col25a1Q99MQ5 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col25a1Q99MQ5 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Col25a1Q99MQ5 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col25a1Q99MQ5 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col25a1Q99MQ5 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Col25a1Q99MQ5 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Col25a1Q99MQ5 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col25a1Q99MQ5 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col25a1Q99MQ5 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col25a1Q99MQ5 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
Col25a1Q99MQ5 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Col25a1Q99MQ5 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Col25a1Q99MQ5 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC15.64■□□□□ 0.09
Col25a1Q99MQ5 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Col25a1Q99MQ5 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Col25a1Q99MQ5 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC15.64■□□□□ 0.09
Col25a1Q99MQ5 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC15.64■□□□□ 0.09
Col25a1Q99MQ5 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC15.64■□□□□ 0.09
Col25a1Q99MQ5 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Col25a1Q99MQ5 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Col25a1Q99MQ5 Gm29361-201ENSMUST00000183323 2000 ntBASIC15.64■□□□□ 0.09
Col25a1Q99MQ5 Gm43179-201ENSMUST00000198797 275 ntBASIC15.64■□□□□ 0.09
Col25a1Q99MQ5 Gm44344-201ENSMUST00000200287 129 ntBASIC15.64■□□□□ 0.09
Col25a1Q99MQ5 AC159747.1-201ENSMUST00000219903 265 ntBASIC15.64■□□□□ 0.09
Col25a1Q99MQ5 CT009510.1-201ENSMUST00000227972 270 ntBASIC15.64■□□□□ 0.09
Col25a1Q99MQ5 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Col25a1Q99MQ5 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Col25a1Q99MQ5 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Col25a1Q99MQ5 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Col25a1Q99MQ5 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Col25a1Q99MQ5 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Col25a1Q99MQ5 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Col25a1Q99MQ5 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Col25a1Q99MQ5 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Col25a1Q99MQ5 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Col25a1Q99MQ5 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Col25a1Q99MQ5 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Col25a1Q99MQ5 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Col25a1Q99MQ5 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
Col25a1Q99MQ5 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Col25a1Q99MQ5 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Col25a1Q99MQ5 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Col25a1Q99MQ5 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Col25a1Q99MQ5 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Col25a1Q99MQ5 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Col25a1Q99MQ5 CT010478.1-201ENSMUST00000220747 2787 ntBASIC15.63■□□□□ 0.09
Col25a1Q99MQ5 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC15.63■□□□□ 0.09
Col25a1Q99MQ5 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC15.63■□□□□ 0.09
Col25a1Q99MQ5 Gm5035-201ENSMUST00000215581 927 ntBASIC15.63■□□□□ 0.09
Col25a1Q99MQ5 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Col25a1Q99MQ5 Gm10478-201ENSMUST00000084451 396 ntBASIC15.63■□□□□ 0.09
Col25a1Q99MQ5 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Col25a1Q99MQ5 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Col25a1Q99MQ5 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Col25a1Q99MQ5 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Col25a1Q99MQ5 AC114008.2-201ENSMUST00000227699 1347 ntBASIC15.63■□□□□ 0.09
Col25a1Q99MQ5 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Col25a1Q99MQ5 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Col25a1Q99MQ5 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Col25a1Q99MQ5 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Col25a1Q99MQ5 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Col25a1Q99MQ5 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Col25a1Q99MQ5 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Col25a1Q99MQ5 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC15.62■□□□□ 0.09
Col25a1Q99MQ5 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Col25a1Q99MQ5 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC15.62■□□□□ 0.09
Col25a1Q99MQ5 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Col25a1Q99MQ5 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC15.62■□□□□ 0.09
Col25a1Q99MQ5 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Col25a1Q99MQ5 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Col25a1Q99MQ5 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Col25a1Q99MQ5 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Col25a1Q99MQ5 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC15.62■□□□□ 0.09
Col25a1Q99MQ5 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC15.62■□□□□ 0.09
Col25a1Q99MQ5 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms