Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Pcdhb20Q91XZ9 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhb20Q91XZ9 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhb20Q91XZ9 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhb20Q91XZ9 AC131586.3-201ENSMUST00000228355 1367 ntBASIC14.76□□□□□ -0.05
Pcdhb20Q91XZ9 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhb20Q91XZ9 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhb20Q91XZ9 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhb20Q91XZ9 Olfr362-201ENSMUST00000100144 954 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Pcdhb20Q91XZ9 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhb20Q91XZ9 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
Pcdhb20Q91XZ9 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhb20Q91XZ9 Gm11779-201ENSMUST00000118541 368 ntBASIC14.76□□□□□ -0.05
Pcdhb20Q91XZ9 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC14.76□□□□□ -0.05
Pcdhb20Q91XZ9 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
Pcdhb20Q91XZ9 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhb20Q91XZ9 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhb20Q91XZ9 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhb20Q91XZ9 AC158388.1-201ENSMUST00000225441 256 ntBASIC14.76□□□□□ -0.05
Pcdhb20Q91XZ9 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhb20Q91XZ9 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhb20Q91XZ9 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhb20Q91XZ9 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhb20Q91XZ9 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhb20Q91XZ9 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhb20Q91XZ9 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
Pcdhb20Q91XZ9 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Pcdhb20Q91XZ9 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhb20Q91XZ9 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Pcdhb20Q91XZ9 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhb20Q91XZ9 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhb20Q91XZ9 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhb20Q91XZ9 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhb20Q91XZ9 Pdlim5-204ENSMUST00000168967 1755 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhb20Q91XZ9 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
Pcdhb20Q91XZ9 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC14.75□□□□□ -0.05
Pcdhb20Q91XZ9 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhb20Q91XZ9 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhb20Q91XZ9 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhb20Q91XZ9 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhb20Q91XZ9 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhb20Q91XZ9 Dmrtc1b-202ENSMUST00000113609 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhb20Q91XZ9 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhb20Q91XZ9 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC14.75□□□□□ -0.05
Pcdhb20Q91XZ9 Gm15640-201ENSMUST00000152070 527 ntTSL 2 BASIC14.75□□□□□ -0.05
Pcdhb20Q91XZ9 Gm8988-201ENSMUST00000155015 1240 ntBASIC14.75□□□□□ -0.05
Pcdhb20Q91XZ9 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhb20Q91XZ9 Gm21958-201ENSMUST00000178832 648 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
Pcdhb20Q91XZ9 Esp18-201ENSMUST00000179848 1257 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Pcdhb20Q91XZ9 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC14.75□□□□□ -0.05
Pcdhb20Q91XZ9 Gm8318-201ENSMUST00000182954 872 ntBASIC14.75□□□□□ -0.05
Pcdhb20Q91XZ9 Gm27300-201ENSMUST00000184085 97 ntBASIC14.75□□□□□ -0.05
Pcdhb20Q91XZ9 Gm27335-201ENSMUST00000184758 97 ntBASIC14.75□□□□□ -0.05
Pcdhb20Q91XZ9 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC14.75□□□□□ -0.05
Pcdhb20Q91XZ9 Gm37440-202ENSMUST00000195572 1227 ntTSL 5 BASIC14.75□□□□□ -0.05
Pcdhb20Q91XZ9 Gm44845-201ENSMUST00000208773 335 ntBASIC14.75□□□□□ -0.05
Pcdhb20Q91XZ9 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhb20Q91XZ9 Olfr938-201ENSMUST00000056499 1190 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Pcdhb20Q91XZ9 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhb20Q91XZ9 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Pcdhb20Q91XZ9 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Pcdhb20Q91XZ9 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhb20Q91XZ9 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhb20Q91XZ9 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhb20Q91XZ9 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC14.75□□□□□ -0.05
Pcdhb20Q91XZ9 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Pcdhb20Q91XZ9 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhb20Q91XZ9 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhb20Q91XZ9 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhb20Q91XZ9 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Pcdhb20Q91XZ9 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Pcdhb20Q91XZ9 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhb20Q91XZ9 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Pcdhb20Q91XZ9 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhb20Q91XZ9 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhb20Q91XZ9 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhb20Q91XZ9 AC140393.3-201ENSMUST00000228396 1352 ntBASIC14.74□□□□□ -0.05
Pcdhb20Q91XZ9 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhb20Q91XZ9 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC14.74□□□□□ -0.05
Pcdhb20Q91XZ9 Gm5366-201ENSMUST00000215494 1338 ntBASIC14.74□□□□□ -0.05
Pcdhb20Q91XZ9 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC14.74□□□□□ -0.05
Pcdhb20Q91XZ9 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC14.74□□□□□ -0.05
Pcdhb20Q91XZ9 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhb20Q91XZ9 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhb20Q91XZ9 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
Pcdhb20Q91XZ9 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhb20Q91XZ9 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhb20Q91XZ9 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhb20Q91XZ9 Gm18692-201ENSMUST00000193047 511 ntBASIC14.74□□□□□ -0.05
Pcdhb20Q91XZ9 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhb20Q91XZ9 Gm45683-201ENSMUST00000210825 1247 ntBASIC14.74□□□□□ -0.05
Pcdhb20Q91XZ9 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhb20Q91XZ9 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhb20Q91XZ9 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC14.74□□□□□ -0.05
Pcdhb20Q91XZ9 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhb20Q91XZ9 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhb20Q91XZ9 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhb20Q91XZ9 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Pcdhb20Q91XZ9 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC14.74□□□□□ -0.05
Pcdhb20Q91XZ9 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 55.6 ms