Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb4Q91XZ6 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb4Q91XZ6 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb4Q91XZ6 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb4Q91XZ6 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Pcdhb4Q91XZ6 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Pcdhb4Q91XZ6 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC15.08■□□□□ 0.01
Pcdhb4Q91XZ6 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
Pcdhb4Q91XZ6 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Pcdhb4Q91XZ6 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC15.08■□□□□ 0.01
Pcdhb4Q91XZ6 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC15.08■□□□□ 0.01
Pcdhb4Q91XZ6 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Pcdhb4Q91XZ6 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdhb4Q91XZ6 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdhb4Q91XZ6 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdhb4Q91XZ6 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdhb4Q91XZ6 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdhb4Q91XZ6 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Pcdhb4Q91XZ6 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC15.08■□□□□ 0
Pcdhb4Q91XZ6 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdhb4Q91XZ6 Gm14722-201ENSMUST00000118943 689 ntBASIC15.08■□□□□ 0
Pcdhb4Q91XZ6 Gm8344-201ENSMUST00000119813 856 ntBASIC15.08■□□□□ 0
Pcdhb4Q91XZ6 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC15.08■□□□□ 0
Pcdhb4Q91XZ6 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdhb4Q91XZ6 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC15.08■□□□□ 0
Pcdhb4Q91XZ6 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdhb4Q91XZ6 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC15.08■□□□□ 0
Pcdhb4Q91XZ6 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdhb4Q91XZ6 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Pcdhb4Q91XZ6 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdhb4Q91XZ6 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdhb4Q91XZ6 Gm5837-201ENSMUST00000191844 1369 ntBASIC15.08■□□□□ 0
Pcdhb4Q91XZ6 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdhb4Q91XZ6 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC15.08■□□□□ 0
Pcdhb4Q91XZ6 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdhb4Q91XZ6 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC15.08■□□□□ 0
Pcdhb4Q91XZ6 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC15.08■□□□□ 0
Pcdhb4Q91XZ6 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb4Q91XZ6 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb4Q91XZ6 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Pcdhb4Q91XZ6 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Pcdhb4Q91XZ6 Gm45504-201ENSMUST00000211407 2107 ntBASIC15.07■□□□□ 0
Pcdhb4Q91XZ6 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb4Q91XZ6 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb4Q91XZ6 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC15.07■□□□□ 0
Pcdhb4Q91XZ6 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb4Q91XZ6 AC160980.1-201ENSMUST00000224136 970 ntBASIC15.07■□□□□ 0
Pcdhb4Q91XZ6 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb4Q91XZ6 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC15.07■□□□□ 0
Pcdhb4Q91XZ6 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb4Q91XZ6 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb4Q91XZ6 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Pcdhb4Q91XZ6 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC15.07■□□□□ 0
Pcdhb4Q91XZ6 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb4Q91XZ6 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb4Q91XZ6 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb4Q91XZ6 Gm11839-201ENSMUST00000120647 1953 ntBASIC15.07■□□□□ 0
Pcdhb4Q91XZ6 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb4Q91XZ6 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb4Q91XZ6 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb4Q91XZ6 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Pcdhb4Q91XZ6 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb4Q91XZ6 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Pcdhb4Q91XZ6 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb4Q91XZ6 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Pcdhb4Q91XZ6 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb4Q91XZ6 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC15.06■□□□□ 0
Pcdhb4Q91XZ6 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdhb4Q91XZ6 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdhb4Q91XZ6 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC15.06■□□□□ 0
Pcdhb4Q91XZ6 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdhb4Q91XZ6 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdhb4Q91XZ6 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdhb4Q91XZ6 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC15.06■□□□□ 0
Pcdhb4Q91XZ6 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdhb4Q91XZ6 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdhb4Q91XZ6 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
Pcdhb4Q91XZ6 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdhb4Q91XZ6 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdhb4Q91XZ6 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdhb4Q91XZ6 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC15.06■□□□□ 0
Pcdhb4Q91XZ6 Ank2-226ENSMUST00000189368 339 ntBASIC15.06■□□□□ 0
Pcdhb4Q91XZ6 Gm18669-201ENSMUST00000216049 778 ntBASIC15.06■□□□□ 0
Pcdhb4Q91XZ6 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC15.06■□□□□ 0
Pcdhb4Q91XZ6 AC159093.1-201ENSMUST00000227779 380 ntBASIC15.06■□□□□ 0
Pcdhb4Q91XZ6 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdhb4Q91XZ6 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdhb4Q91XZ6 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdhb4Q91XZ6 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdhb4Q91XZ6 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdhb4Q91XZ6 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdhb4Q91XZ6 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdhb4Q91XZ6 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdhb4Q91XZ6 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdhb4Q91XZ6 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Pcdhb4Q91XZ6 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdhb4Q91XZ6 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdhb4Q91XZ6 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC15.06■□□□□ 0
Pcdhb4Q91XZ6 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdhb4Q91XZ6 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms