Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhb6Q91XZ4 Gm27628-201ENSMUST00000184911 107 ntBASIC15.56■□□□□ 0.08
Pcdhb6Q91XZ4 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC15.56■□□□□ 0.08
Pcdhb6Q91XZ4 AC084391.1-201ENSMUST00000200651 141 ntBASIC15.56■□□□□ 0.08
Pcdhb6Q91XZ4 Gm42670-201ENSMUST00000201816 1292 ntBASIC15.56■□□□□ 0.08
Pcdhb6Q91XZ4 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhb6Q91XZ4 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Pcdhb6Q91XZ4 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhb6Q91XZ4 Gm15590-201ENSMUST00000078419 552 ntBASIC15.56■□□□□ 0.08
Pcdhb6Q91XZ4 Gm13294-201ENSMUST00000121757 1330 ntBASIC15.56■□□□□ 0.08
Pcdhb6Q91XZ4 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhb6Q91XZ4 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhb6Q91XZ4 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Pcdhb6Q91XZ4 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhb6Q91XZ4 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
Pcdhb6Q91XZ4 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhb6Q91XZ4 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhb6Q91XZ4 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC15.56■□□□□ 0.08
Pcdhb6Q91XZ4 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Pcdhb6Q91XZ4 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Pcdhb6Q91XZ4 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhb6Q91XZ4 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Pcdhb6Q91XZ4 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb6Q91XZ4 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb6Q91XZ4 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb6Q91XZ4 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb6Q91XZ4 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb6Q91XZ4 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb6Q91XZ4 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb6Q91XZ4 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb6Q91XZ4 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb6Q91XZ4 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC15.55■□□□□ 0.08
Pcdhb6Q91XZ4 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb6Q91XZ4 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb6Q91XZ4 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Pcdhb6Q91XZ4 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb6Q91XZ4 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb6Q91XZ4 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC15.55■□□□□ 0.08
Pcdhb6Q91XZ4 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb6Q91XZ4 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb6Q91XZ4 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC15.55■□□□□ 0.08
Pcdhb6Q91XZ4 AC164567.1-201ENSMUST00000219185 960 ntBASIC15.55■□□□□ 0.08
Pcdhb6Q91XZ4 Gm18246-201ENSMUST00000221023 728 ntBASIC15.55■□□□□ 0.08
Pcdhb6Q91XZ4 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb6Q91XZ4 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb6Q91XZ4 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb6Q91XZ4 Gm10313-201ENSMUST00000095320 1002 ntBASIC15.55■□□□□ 0.08
Pcdhb6Q91XZ4 Mxra8os-201ENSMUST00000097740 687 ntBASIC15.55■□□□□ 0.08
Pcdhb6Q91XZ4 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb6Q91XZ4 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb6Q91XZ4 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb6Q91XZ4 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb6Q91XZ4 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
Pcdhb6Q91XZ4 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb6Q91XZ4 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb6Q91XZ4 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhb6Q91XZ4 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhb6Q91XZ4 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhb6Q91XZ4 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC15.54■□□□□ 0.08
Pcdhb6Q91XZ4 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhb6Q91XZ4 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhb6Q91XZ4 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhb6Q91XZ4 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhb6Q91XZ4 Gm43195-201ENSMUST00000200614 2332 ntBASIC15.54■□□□□ 0.08
Pcdhb6Q91XZ4 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhb6Q91XZ4 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhb6Q91XZ4 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC15.54■□□□□ 0.08
Pcdhb6Q91XZ4 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC15.54■□□□□ 0.08
Pcdhb6Q91XZ4 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhb6Q91XZ4 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Pcdhb6Q91XZ4 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhb6Q91XZ4 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhb6Q91XZ4 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC15.54■□□□□ 0.08
Pcdhb6Q91XZ4 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhb6Q91XZ4 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhb6Q91XZ4 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhb6Q91XZ4 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhb6Q91XZ4 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhb6Q91XZ4 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhb6Q91XZ4 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhb6Q91XZ4 Gm43598-201ENSMUST00000202482 2479 ntBASIC15.53■□□□□ 0.08
Pcdhb6Q91XZ4 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhb6Q91XZ4 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhb6Q91XZ4 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhb6Q91XZ4 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC15.53■□□□□ 0.08
Pcdhb6Q91XZ4 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC15.53■□□□□ 0.08
Pcdhb6Q91XZ4 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhb6Q91XZ4 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhb6Q91XZ4 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC15.53■□□□□ 0.08
Pcdhb6Q91XZ4 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhb6Q91XZ4 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC15.53■□□□□ 0.08
Pcdhb6Q91XZ4 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhb6Q91XZ4 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhb6Q91XZ4 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
Pcdhb6Q91XZ4 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhb6Q91XZ4 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhb6Q91XZ4 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhb6Q91XZ4 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhb6Q91XZ4 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhb6Q91XZ4 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms