Protein–RNA interactions for Protein: Q91XZ2

Pcdhb8, Protocadherin beta-8, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb8Q91XZ2 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhb8Q91XZ2 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhb8Q91XZ2 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhb8Q91XZ2 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC14.82□□□□□ -0.04
Pcdhb8Q91XZ2 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC14.82□□□□□ -0.04
Pcdhb8Q91XZ2 Gm37305-201ENSMUST00000195714 4279 ntBASIC14.82□□□□□ -0.04
Pcdhb8Q91XZ2 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Pcdhb8Q91XZ2 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC14.82□□□□□ -0.04
Pcdhb8Q91XZ2 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhb8Q91XZ2 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhb8Q91XZ2 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhb8Q91XZ2 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhb8Q91XZ2 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhb8Q91XZ2 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhb8Q91XZ2 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhb8Q91XZ2 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Pcdhb8Q91XZ2 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC14.82□□□□□ -0.04
Pcdhb8Q91XZ2 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhb8Q91XZ2 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhb8Q91XZ2 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhb8Q91XZ2 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhb8Q91XZ2 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhb8Q91XZ2 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhb8Q91XZ2 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhb8Q91XZ2 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC14.81□□□□□ -0.04
Pcdhb8Q91XZ2 Gm25990-201ENSMUST00000102440 86 ntBASIC14.81□□□□□ -0.04
Pcdhb8Q91XZ2 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC14.81□□□□□ -0.04
Pcdhb8Q91XZ2 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC14.81□□□□□ -0.04
Pcdhb8Q91XZ2 Gm6089-201ENSMUST00000197666 938 ntBASIC14.81□□□□□ -0.04
Pcdhb8Q91XZ2 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC14.81□□□□□ -0.04
Pcdhb8Q91XZ2 Umpk-ps-201ENSMUST00000211897 827 ntBASIC14.81□□□□□ -0.04
Pcdhb8Q91XZ2 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC14.81□□□□□ -0.04
Pcdhb8Q91XZ2 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhb8Q91XZ2 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhb8Q91XZ2 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhb8Q91XZ2 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhb8Q91XZ2 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhb8Q91XZ2 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhb8Q91XZ2 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhb8Q91XZ2 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhb8Q91XZ2 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhb8Q91XZ2 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhb8Q91XZ2 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhb8Q91XZ2 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhb8Q91XZ2 AC157650.3-201ENSMUST00000225058 1476 ntBASIC14.81□□□□□ -0.04
Pcdhb8Q91XZ2 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhb8Q91XZ2 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhb8Q91XZ2 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhb8Q91XZ2 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhb8Q91XZ2 Gm45760-201ENSMUST00000212190 1782 ntBASIC14.8□□□□□ -0.04
Pcdhb8Q91XZ2 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Pcdhb8Q91XZ2 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Pcdhb8Q91XZ2 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhb8Q91XZ2 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhb8Q91XZ2 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhb8Q91XZ2 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhb8Q91XZ2 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC14.8□□□□□ -0.04
Pcdhb8Q91XZ2 Gm2308-201ENSMUST00000166539 1004 ntBASIC14.8□□□□□ -0.04
Pcdhb8Q91XZ2 Gm17971-201ENSMUST00000190239 806 ntBASIC14.8□□□□□ -0.04
Pcdhb8Q91XZ2 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhb8Q91XZ2 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhb8Q91XZ2 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhb8Q91XZ2 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhb8Q91XZ2 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhb8Q91XZ2 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhb8Q91XZ2 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC14.8□□□□□ -0.04
Pcdhb8Q91XZ2 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhb8Q91XZ2 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC14.8□□□□□ -0.04
Pcdhb8Q91XZ2 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhb8Q91XZ2 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhb8Q91XZ2 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhb8Q91XZ2 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhb8Q91XZ2 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhb8Q91XZ2 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Pcdhb8Q91XZ2 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhb8Q91XZ2 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhb8Q91XZ2 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhb8Q91XZ2 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhb8Q91XZ2 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhb8Q91XZ2 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhb8Q91XZ2 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC14.79□□□□□ -0.04
Pcdhb8Q91XZ2 Gm3928-201ENSMUST00000121141 1307 ntBASIC14.79□□□□□ -0.04
Pcdhb8Q91XZ2 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhb8Q91XZ2 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhb8Q91XZ2 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC14.79□□□□□ -0.04
Pcdhb8Q91XZ2 Gm18856-201ENSMUST00000178096 1374 ntBASIC14.79□□□□□ -0.04
Pcdhb8Q91XZ2 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC14.79□□□□□ -0.04
Pcdhb8Q91XZ2 Gm37500-201ENSMUST00000192059 1443 ntBASIC14.79□□□□□ -0.04
Pcdhb8Q91XZ2 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhb8Q91XZ2 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhb8Q91XZ2 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhb8Q91XZ2 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhb8Q91XZ2 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhb8Q91XZ2 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhb8Q91XZ2 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhb8Q91XZ2 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhb8Q91XZ2 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Pcdhb8Q91XZ2 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhb8Q91XZ2 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhb8Q91XZ2 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms