Protein–RNA interactions for Protein: Q91XY8

Pcdhga11, Protocadherin gamma A11, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga11Q91XY8 Mir8098-201ENSMUST00000184011 137 ntBASIC14.66□□□□□ -0.06
Pcdhga11Q91XY8 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC14.66□□□□□ -0.06
Pcdhga11Q91XY8 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Pcdhga11Q91XY8 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhga11Q91XY8 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhga11Q91XY8 AC133598.3-202ENSMUST00000224219 531 ntBASIC14.66□□□□□ -0.06
Pcdhga11Q91XY8 Rbfox2-207ENSMUST00000227533 1041 ntBASIC14.66□□□□□ -0.06
Pcdhga11Q91XY8 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhga11Q91XY8 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC14.66□□□□□ -0.06
Pcdhga11Q91XY8 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhga11Q91XY8 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhga11Q91XY8 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhga11Q91XY8 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC14.66□□□□□ -0.06
Pcdhga11Q91XY8 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhga11Q91XY8 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhga11Q91XY8 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhga11Q91XY8 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Pcdhga11Q91XY8 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhga11Q91XY8 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhga11Q91XY8 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhga11Q91XY8 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhga11Q91XY8 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhga11Q91XY8 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhga11Q91XY8 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhga11Q91XY8 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhga11Q91XY8 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC14.65□□□□□ -0.06
Pcdhga11Q91XY8 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhga11Q91XY8 Gm8097-201ENSMUST00000117903 829 ntBASIC14.65□□□□□ -0.06
Pcdhga11Q91XY8 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhga11Q91XY8 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC14.65□□□□□ -0.06
Pcdhga11Q91XY8 Cmtm5-203ENSMUST00000227441 610 ntBASIC14.65□□□□□ -0.06
Pcdhga11Q91XY8 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Pcdhga11Q91XY8 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC14.65□□□□□ -0.06
Pcdhga11Q91XY8 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhga11Q91XY8 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhga11Q91XY8 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhga11Q91XY8 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC14.65□□□□□ -0.06
Pcdhga11Q91XY8 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Pcdhga11Q91XY8 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhga11Q91XY8 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhga11Q91XY8 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhga11Q91XY8 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Pcdhga11Q91XY8 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhga11Q91XY8 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.07
Pcdhga11Q91XY8 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhga11Q91XY8 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhga11Q91XY8 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhga11Q91XY8 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhga11Q91XY8 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhga11Q91XY8 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Pcdhga11Q91XY8 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhga11Q91XY8 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Pcdhga11Q91XY8 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Pcdhga11Q91XY8 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC14.64□□□□□ -0.07
Pcdhga11Q91XY8 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Pcdhga11Q91XY8 Gm13830-205ENSMUST00000201195 1155 ntBASIC14.64□□□□□ -0.07
Pcdhga11Q91XY8 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC14.64□□□□□ -0.07
Pcdhga11Q91XY8 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhga11Q91XY8 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC14.64□□□□□ -0.07
Pcdhga11Q91XY8 AC093926.2-201ENSMUST00000214468 1228 ntBASIC14.64□□□□□ -0.07
Pcdhga11Q91XY8 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhga11Q91XY8 Mzt1-203ENSMUST00000227948 952 ntBASIC14.64□□□□□ -0.07
Pcdhga11Q91XY8 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Pcdhga11Q91XY8 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Pcdhga11Q91XY8 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhga11Q91XY8 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhga11Q91XY8 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC14.64□□□□□ -0.07
Pcdhga11Q91XY8 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Pcdhga11Q91XY8 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhga11Q91XY8 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhga11Q91XY8 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhga11Q91XY8 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhga11Q91XY8 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC14.64□□□□□ -0.07
Pcdhga11Q91XY8 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhga11Q91XY8 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhga11Q91XY8 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhga11Q91XY8 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhga11Q91XY8 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhga11Q91XY8 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhga11Q91XY8 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhga11Q91XY8 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC14.63□□□□□ -0.07
Pcdhga11Q91XY8 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhga11Q91XY8 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhga11Q91XY8 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC14.63□□□□□ -0.07
Pcdhga11Q91XY8 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC14.63□□□□□ -0.07
Pcdhga11Q91XY8 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhga11Q91XY8 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC14.63□□□□□ -0.07
Pcdhga11Q91XY8 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Pcdhga11Q91XY8 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhga11Q91XY8 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhga11Q91XY8 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhga11Q91XY8 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC14.63□□□□□ -0.07
Pcdhga11Q91XY8 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC14.63□□□□□ -0.07
Pcdhga11Q91XY8 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC14.63□□□□□ -0.07
Pcdhga11Q91XY8 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC14.63□□□□□ -0.07
Pcdhga11Q91XY8 AC164629.2-201ENSMUST00000217916 270 ntBASIC14.63□□□□□ -0.07
Pcdhga11Q91XY8 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhga11Q91XY8 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC14.63□□□□□ -0.07
Pcdhga11Q91XY8 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhga11Q91XY8 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms