Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhga4Q91XY4 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhga4Q91XY4 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhga4Q91XY4 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhga4Q91XY4 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhga4Q91XY4 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhga4Q91XY4 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhga4Q91XY4 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhga4Q91XY4 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC14.93□□□□□ -0.02
Pcdhga4Q91XY4 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC14.93□□□□□ -0.02
Pcdhga4Q91XY4 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Pcdhga4Q91XY4 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhga4Q91XY4 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhga4Q91XY4 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhga4Q91XY4 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhga4Q91XY4 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Pcdhga4Q91XY4 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC14.93□□□□□ -0.02
Pcdhga4Q91XY4 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC14.93□□□□□ -0.02
Pcdhga4Q91XY4 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhga4Q91XY4 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC14.93□□□□□ -0.02
Pcdhga4Q91XY4 Gm7787-201ENSMUST00000216858 688 ntBASIC14.93□□□□□ -0.02
Pcdhga4Q91XY4 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhga4Q91XY4 Gm15590-201ENSMUST00000078419 552 ntBASIC14.93□□□□□ -0.02
Pcdhga4Q91XY4 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhga4Q91XY4 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhga4Q91XY4 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhga4Q91XY4 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhga4Q91XY4 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhga4Q91XY4 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhga4Q91XY4 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC14.93□□□□□ -0.02
Pcdhga4Q91XY4 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhga4Q91XY4 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhga4Q91XY4 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhga4Q91XY4 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhga4Q91XY4 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhga4Q91XY4 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhga4Q91XY4 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC14.93□□□□□ -0.02
Pcdhga4Q91XY4 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhga4Q91XY4 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhga4Q91XY4 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Pcdhga4Q91XY4 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhga4Q91XY4 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhga4Q91XY4 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhga4Q91XY4 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhga4Q91XY4 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhga4Q91XY4 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhga4Q91XY4 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhga4Q91XY4 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhga4Q91XY4 Gm10584-201ENSMUST00000207036 2628 ntBASIC14.92□□□□□ -0.02
Pcdhga4Q91XY4 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhga4Q91XY4 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC14.92□□□□□ -0.02
Pcdhga4Q91XY4 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC14.92□□□□□ -0.02
Pcdhga4Q91XY4 AC159106.1-201ENSMUST00000224421 690 ntBASIC14.92□□□□□ -0.02
Pcdhga4Q91XY4 AC158538.2-201ENSMUST00000225455 906 ntBASIC14.92□□□□□ -0.02
Pcdhga4Q91XY4 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Pcdhga4Q91XY4 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhga4Q91XY4 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhga4Q91XY4 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhga4Q91XY4 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhga4Q91XY4 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhga4Q91XY4 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhga4Q91XY4 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhga4Q91XY4 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
Pcdhga4Q91XY4 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC14.92□□□□□ -0.02
Pcdhga4Q91XY4 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhga4Q91XY4 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhga4Q91XY4 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhga4Q91XY4 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Pcdhga4Q91XY4 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhga4Q91XY4 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhga4Q91XY4 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhga4Q91XY4 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhga4Q91XY4 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhga4Q91XY4 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhga4Q91XY4 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhga4Q91XY4 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhga4Q91XY4 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhga4Q91XY4 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhga4Q91XY4 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhga4Q91XY4 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhga4Q91XY4 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhga4Q91XY4 Gm18489-201ENSMUST00000172565 551 ntBASIC14.91□□□□□ -0.02
Pcdhga4Q91XY4 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhga4Q91XY4 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC14.91□□□□□ -0.02
Pcdhga4Q91XY4 AC084391.1-201ENSMUST00000200651 141 ntBASIC14.91□□□□□ -0.02
Pcdhga4Q91XY4 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC14.91□□□□□ -0.02
Pcdhga4Q91XY4 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC14.91□□□□□ -0.02
Pcdhga4Q91XY4 Psmb5-202ENSMUST00000227257 622 ntBASIC14.91□□□□□ -0.02
Pcdhga4Q91XY4 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhga4Q91XY4 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhga4Q91XY4 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhga4Q91XY4 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhga4Q91XY4 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhga4Q91XY4 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC14.91□□□□□ -0.02
Pcdhga4Q91XY4 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhga4Q91XY4 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhga4Q91XY4 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Pcdhga4Q91XY4 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC14.91□□□□□ -0.02
Pcdhga4Q91XY4 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhga4Q91XY4 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms