Protein–RNA interactions for Protein: Q91VD8

Pcdhb17, MCG141290, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb17Q91VD8 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhb17Q91VD8 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC15.82■□□□□ 0.12
Pcdhb17Q91VD8 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhb17Q91VD8 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhb17Q91VD8 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhb17Q91VD8 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhb17Q91VD8 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhb17Q91VD8 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhb17Q91VD8 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
Pcdhb17Q91VD8 E130114P18Rik-201ENSMUST00000107067 1092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhb17Q91VD8 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC15.81■□□□□ 0.12
Pcdhb17Q91VD8 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhb17Q91VD8 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhb17Q91VD8 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC15.81■□□□□ 0.12
Pcdhb17Q91VD8 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhb17Q91VD8 Gm27300-201ENSMUST00000184085 97 ntBASIC15.81■□□□□ 0.12
Pcdhb17Q91VD8 Gm27335-201ENSMUST00000184758 97 ntBASIC15.81■□□□□ 0.12
Pcdhb17Q91VD8 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhb17Q91VD8 Olfr282-203ENSMUST00000213608 1374 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Pcdhb17Q91VD8 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC15.81■□□□□ 0.12
Pcdhb17Q91VD8 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhb17Q91VD8 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhb17Q91VD8 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhb17Q91VD8 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhb17Q91VD8 Ccdc54-201ENSMUST00000062439 1296 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Pcdhb17Q91VD8 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhb17Q91VD8 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhb17Q91VD8 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Pcdhb17Q91VD8 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhb17Q91VD8 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Pcdhb17Q91VD8 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhb17Q91VD8 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhb17Q91VD8 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC15.8■□□□□ 0.12
Pcdhb17Q91VD8 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC15.8■□□□□ 0.12
Pcdhb17Q91VD8 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Pcdhb17Q91VD8 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb17Q91VD8 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Pcdhb17Q91VD8 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb17Q91VD8 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb17Q91VD8 Milr1-202ENSMUST00000106794 1514 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb17Q91VD8 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb17Q91VD8 Gm37863-201ENSMUST00000194911 1457 ntBASIC15.8■□□□□ 0.12
Pcdhb17Q91VD8 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb17Q91VD8 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb17Q91VD8 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb17Q91VD8 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb17Q91VD8 Gm13294-201ENSMUST00000121757 1330 ntBASIC15.8■□□□□ 0.12
Pcdhb17Q91VD8 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb17Q91VD8 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC15.8■□□□□ 0.12
Pcdhb17Q91VD8 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb17Q91VD8 Gm5277-201ENSMUST00000164923 556 ntBASIC15.8■□□□□ 0.12
Pcdhb17Q91VD8 Gm37440-202ENSMUST00000195572 1227 ntTSL 5 BASIC15.8■□□□□ 0.12
Pcdhb17Q91VD8 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb17Q91VD8 Gm19189-201ENSMUST00000221689 754 ntBASIC15.8■□□□□ 0.12
Pcdhb17Q91VD8 CT009510.1-201ENSMUST00000227972 270 ntBASIC15.8■□□□□ 0.12
Pcdhb17Q91VD8 Snapc5-201ENSMUST00000034965 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb17Q91VD8 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb17Q91VD8 Tas2r117-201ENSMUST00000068302 1158 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Pcdhb17Q91VD8 mt-Nd2-201ENSMUST00000082396 1038 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Pcdhb17Q91VD8 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb17Q91VD8 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb17Q91VD8 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb17Q91VD8 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb17Q91VD8 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb17Q91VD8 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb17Q91VD8 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb17Q91VD8 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Pcdhb17Q91VD8 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb17Q91VD8 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Pcdhb17Q91VD8 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb17Q91VD8 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb17Q91VD8 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb17Q91VD8 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb17Q91VD8 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb17Q91VD8 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb17Q91VD8 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb17Q91VD8 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb17Q91VD8 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb17Q91VD8 Gm12372-201ENSMUST00000121654 768 ntBASIC15.79■□□□□ 0.12
Pcdhb17Q91VD8 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC15.79■□□□□ 0.12
Pcdhb17Q91VD8 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
Pcdhb17Q91VD8 Gm27216-202ENSMUST00000184100 635 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb17Q91VD8 Gm17983-201ENSMUST00000190766 594 ntBASIC15.79■□□□□ 0.12
Pcdhb17Q91VD8 Gm42565-201ENSMUST00000197839 572 ntTSL 5 BASIC15.79■□□□□ 0.12
Pcdhb17Q91VD8 Gm6681-201ENSMUST00000205215 607 ntBASIC15.79■□□□□ 0.12
Pcdhb17Q91VD8 AC160060.2-201ENSMUST00000220151 811 ntTSL 5 BASIC15.79■□□□□ 0.12
Pcdhb17Q91VD8 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb17Q91VD8 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC15.79■□□□□ 0.12
Pcdhb17Q91VD8 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Pcdhb17Q91VD8 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb17Q91VD8 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC15.79■□□□□ 0.12
Pcdhb17Q91VD8 AC122901.1-201ENSMUST00000214203 1790 ntBASIC15.79■□□□□ 0.12
Pcdhb17Q91VD8 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb17Q91VD8 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC15.79■□□□□ 0.12
Pcdhb17Q91VD8 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb17Q91VD8 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb17Q91VD8 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhb17Q91VD8 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhb17Q91VD8 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC15.78■□□□□ 0.12
Pcdhb17Q91VD8 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms