Protein–RNA interactions for Protein: Q91UZ8

Pcdhb11, MCG141285, mousemouse

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb11Q91UZ8 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhb11Q91UZ8 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhb11Q91UZ8 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Pcdhb11Q91UZ8 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhb11Q91UZ8 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC15.5■□□□□ 0.07
Pcdhb11Q91UZ8 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC15.5■□□□□ 0.07
Pcdhb11Q91UZ8 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhb11Q91UZ8 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhb11Q91UZ8 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhb11Q91UZ8 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb11Q91UZ8 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb11Q91UZ8 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb11Q91UZ8 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb11Q91UZ8 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb11Q91UZ8 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb11Q91UZ8 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb11Q91UZ8 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC15.49■□□□□ 0.07
Pcdhb11Q91UZ8 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb11Q91UZ8 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb11Q91UZ8 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC15.49■□□□□ 0.07
Pcdhb11Q91UZ8 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb11Q91UZ8 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb11Q91UZ8 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb11Q91UZ8 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb11Q91UZ8 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC15.49■□□□□ 0.07
Pcdhb11Q91UZ8 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb11Q91UZ8 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb11Q91UZ8 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb11Q91UZ8 Gm8242-201ENSMUST00000193029 1420 ntBASIC15.49■□□□□ 0.07
Pcdhb11Q91UZ8 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC15.49■□□□□ 0.07
Pcdhb11Q91UZ8 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb11Q91UZ8 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
Pcdhb11Q91UZ8 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb11Q91UZ8 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Pcdhb11Q91UZ8 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb11Q91UZ8 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb11Q91UZ8 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb11Q91UZ8 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb11Q91UZ8 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC15.48■□□□□ 0.07
Pcdhb11Q91UZ8 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb11Q91UZ8 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb11Q91UZ8 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb11Q91UZ8 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC15.48■□□□□ 0.07
Pcdhb11Q91UZ8 Gm14140-201ENSMUST00000119999 995 ntBASIC15.48■□□□□ 0.07
Pcdhb11Q91UZ8 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC15.48■□□□□ 0.07
Pcdhb11Q91UZ8 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC15.48■□□□□ 0.07
Pcdhb11Q91UZ8 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC15.48■□□□□ 0.07
Pcdhb11Q91UZ8 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb11Q91UZ8 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC15.48■□□□□ 0.07
Pcdhb11Q91UZ8 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb11Q91UZ8 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb11Q91UZ8 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
Pcdhb11Q91UZ8 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb11Q91UZ8 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb11Q91UZ8 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb11Q91UZ8 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb11Q91UZ8 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb11Q91UZ8 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb11Q91UZ8 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb11Q91UZ8 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb11Q91UZ8 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb11Q91UZ8 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb11Q91UZ8 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb11Q91UZ8 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb11Q91UZ8 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb11Q91UZ8 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb11Q91UZ8 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb11Q91UZ8 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb11Q91UZ8 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb11Q91UZ8 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Pcdhb11Q91UZ8 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC15.47■□□□□ 0.07
Pcdhb11Q91UZ8 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb11Q91UZ8 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb11Q91UZ8 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb11Q91UZ8 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb11Q91UZ8 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb11Q91UZ8 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
Pcdhb11Q91UZ8 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC15.47■□□□□ 0.07
Pcdhb11Q91UZ8 Celf4-206ENSMUST00000224553 1729 ntBASIC15.47■□□□□ 0.07
Pcdhb11Q91UZ8 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb11Q91UZ8 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb11Q91UZ8 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb11Q91UZ8 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC15.47■□□□□ 0.07
Pcdhb11Q91UZ8 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb11Q91UZ8 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb11Q91UZ8 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC15.47■□□□□ 0.07
Pcdhb11Q91UZ8 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb11Q91UZ8 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb11Q91UZ8 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Pcdhb11Q91UZ8 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb11Q91UZ8 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC15.47■□□□□ 0.07
Pcdhb11Q91UZ8 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb11Q91UZ8 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb11Q91UZ8 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb11Q91UZ8 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb11Q91UZ8 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb11Q91UZ8 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb11Q91UZ8 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb11Q91UZ8 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
Pcdhb11Q91UZ8 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms