Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Trim60Q8VI40 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim60Q8VI40 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC15.68■□□□□ 0.1
Trim60Q8VI40 Gm37736-201ENSMUST00000193564 2802 ntBASIC15.68■□□□□ 0.1
Trim60Q8VI40 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim60Q8VI40 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim60Q8VI40 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim60Q8VI40 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim60Q8VI40 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim60Q8VI40 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim60Q8VI40 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim60Q8VI40 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trim60Q8VI40 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Trim60Q8VI40 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trim60Q8VI40 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Trim60Q8VI40 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim60Q8VI40 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim60Q8VI40 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim60Q8VI40 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim60Q8VI40 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC15.68■□□□□ 0.1
Trim60Q8VI40 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim60Q8VI40 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC15.68■□□□□ 0.1
Trim60Q8VI40 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim60Q8VI40 Gm38318-201ENSMUST00000195769 1706 ntBASIC15.68■□□□□ 0.1
Trim60Q8VI40 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim60Q8VI40 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim60Q8VI40 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim60Q8VI40 Gm14026-201ENSMUST00000120625 1789 ntBASIC15.67■□□□□ 0.1
Trim60Q8VI40 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Trim60Q8VI40 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trim60Q8VI40 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim60Q8VI40 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim60Q8VI40 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim60Q8VI40 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
Trim60Q8VI40 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim60Q8VI40 Efs-202ENSMUST00000227037 2540 ntBASIC15.67■□□□□ 0.1
Trim60Q8VI40 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim60Q8VI40 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim60Q8VI40 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim60Q8VI40 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Trim60Q8VI40 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trim60Q8VI40 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim60Q8VI40 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim60Q8VI40 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Trim60Q8VI40 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim60Q8VI40 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim60Q8VI40 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC15.66■□□□□ 0.1
Trim60Q8VI40 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trim60Q8VI40 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trim60Q8VI40 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim60Q8VI40 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim60Q8VI40 Gm8097-201ENSMUST00000117903 829 ntBASIC15.66■□□□□ 0.1
Trim60Q8VI40 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trim60Q8VI40 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
Trim60Q8VI40 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim60Q8VI40 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC15.66■□□□□ 0.1
Trim60Q8VI40 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trim60Q8VI40 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC15.66■□□□□ 0.1
Trim60Q8VI40 AC122024.2-201ENSMUST00000220086 871 ntBASIC15.66■□□□□ 0.1
Trim60Q8VI40 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Trim60Q8VI40 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim60Q8VI40 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim60Q8VI40 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Trim60Q8VI40 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trim60Q8VI40 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim60Q8VI40 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trim60Q8VI40 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC15.66■□□□□ 0.1
Trim60Q8VI40 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim60Q8VI40 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim60Q8VI40 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim60Q8VI40 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim60Q8VI40 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC15.65■□□□□ 0.1
Trim60Q8VI40 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC15.65■□□□□ 0.1
Trim60Q8VI40 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim60Q8VI40 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim60Q8VI40 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim60Q8VI40 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim60Q8VI40 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim60Q8VI40 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim60Q8VI40 Gm7284-201ENSMUST00000131667 944 ntBASIC15.65■□□□□ 0.1
Trim60Q8VI40 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC15.65■□□□□ 0.1
Trim60Q8VI40 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim60Q8VI40 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trim60Q8VI40 Gm33142-201ENSMUST00000193913 867 ntBASIC15.65■□□□□ 0.1
Trim60Q8VI40 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC15.65■□□□□ 0.1
Trim60Q8VI40 CT009510.1-201ENSMUST00000227972 270 ntBASIC15.65■□□□□ 0.1
Trim60Q8VI40 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC15.65■□□□□ 0.1
Trim60Q8VI40 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim60Q8VI40 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC15.65■□□□□ 0.1
Trim60Q8VI40 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
Trim60Q8VI40 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim60Q8VI40 Celf4-206ENSMUST00000224553 1729 ntBASIC15.65■□□□□ 0.1
Trim60Q8VI40 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim60Q8VI40 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trim60Q8VI40 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
Trim60Q8VI40 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
Trim60Q8VI40 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim60Q8VI40 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC15.64■□□□□ 0.09
Trim60Q8VI40 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim60Q8VI40 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms