Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC15.29■□□□□ 0.04
Rpa1Q8VEE4 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC15.29■□□□□ 0.04
Rpa1Q8VEE4 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rpa1Q8VEE4 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC15.29■□□□□ 0.04
Rpa1Q8VEE4 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rpa1Q8VEE4 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Rpa1Q8VEE4 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC15.29■□□□□ 0.04
Rpa1Q8VEE4 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
Rpa1Q8VEE4 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rpa1Q8VEE4 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rpa1Q8VEE4 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rpa1Q8VEE4 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rpa1Q8VEE4 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC15.29■□□□□ 0.04
Rpa1Q8VEE4 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rpa1Q8VEE4 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Rpa1Q8VEE4 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rpa1Q8VEE4 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rpa1Q8VEE4 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Rpa1Q8VEE4 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rpa1Q8VEE4 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rpa1Q8VEE4 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rpa1Q8VEE4 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rpa1Q8VEE4 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rpa1Q8VEE4 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rpa1Q8VEE4 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rpa1Q8VEE4 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Rpa1Q8VEE4 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Rpa1Q8VEE4 Gm27389-201ENSMUST00000183622 195 ntBASIC15.28■□□□□ 0.04
Rpa1Q8VEE4 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rpa1Q8VEE4 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Rpa1Q8VEE4 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Rpa1Q8VEE4 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rpa1Q8VEE4 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC15.28■□□□□ 0.04
Rpa1Q8VEE4 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Rpa1Q8VEE4 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rpa1Q8VEE4 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rpa1Q8VEE4 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rpa1Q8VEE4 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Rpa1Q8VEE4 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC15.28■□□□□ 0.04
Rpa1Q8VEE4 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rpa1Q8VEE4 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rpa1Q8VEE4 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rpa1Q8VEE4 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Rpa1Q8VEE4 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rpa1Q8VEE4 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rpa1Q8VEE4 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rpa1Q8VEE4 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rpa1Q8VEE4 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rpa1Q8VEE4 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rpa1Q8VEE4 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.04
Rpa1Q8VEE4 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Rpa1Q8VEE4 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Rpa1Q8VEE4 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rpa1Q8VEE4 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rpa1Q8VEE4 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rpa1Q8VEE4 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rpa1Q8VEE4 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Rpa1Q8VEE4 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rpa1Q8VEE4 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Rpa1Q8VEE4 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
Rpa1Q8VEE4 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
Rpa1Q8VEE4 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC15.27■□□□□ 0.04
Rpa1Q8VEE4 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rpa1Q8VEE4 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rpa1Q8VEE4 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rpa1Q8VEE4 Gm9987-201ENSMUST00000069768 567 ntBASIC15.27■□□□□ 0.04
Rpa1Q8VEE4 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Rpa1Q8VEE4 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rpa1Q8VEE4 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Rpa1Q8VEE4 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rpa1Q8VEE4 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rpa1Q8VEE4 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rpa1Q8VEE4 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rpa1Q8VEE4 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Rpa1Q8VEE4 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rpa1Q8VEE4 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Rpa1Q8VEE4 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rpa1Q8VEE4 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rpa1Q8VEE4 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rpa1Q8VEE4 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rpa1Q8VEE4 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rpa1Q8VEE4 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rpa1Q8VEE4 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rpa1Q8VEE4 Gm37691-201ENSMUST00000192147 2573 ntBASIC15.26■□□□□ 0.03
Rpa1Q8VEE4 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rpa1Q8VEE4 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rpa1Q8VEE4 Gm21559-201ENSMUST00000220638 855 ntBASIC15.26■□□□□ 0.03
Rpa1Q8VEE4 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC15.26■□□□□ 0.03
Rpa1Q8VEE4 Gm8587-201ENSMUST00000076538 843 ntBASIC15.26■□□□□ 0.03
Rpa1Q8VEE4 Gm38391-201ENSMUST00000191720 4069 ntBASIC15.26■□□□□ 0.03
Rpa1Q8VEE4 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rpa1Q8VEE4 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Rpa1Q8VEE4 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Rpa1Q8VEE4 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rpa1Q8VEE4 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rpa1Q8VEE4 Gm38318-201ENSMUST00000195769 1706 ntBASIC15.26■□□□□ 0.03
Rpa1Q8VEE4 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC15.26■□□□□ 0.03
Rpa1Q8VEE4 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rpa1Q8VEE4 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Rpa1Q8VEE4 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms