Protein–RNA interactions for Protein: Q8VCH8

Ubxn4, UBX domain-containing protein 4, mousemouse

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubxn4Q8VCH8 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC17.22■□□□□ 0.35
Ubxn4Q8VCH8 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Ubxn4Q8VCH8 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC17.22■□□□□ 0.35
Ubxn4Q8VCH8 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ubxn4Q8VCH8 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ubxn4Q8VCH8 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC17.22■□□□□ 0.35
Ubxn4Q8VCH8 Gm8344-201ENSMUST00000119813 856 ntBASIC17.22■□□□□ 0.35
Ubxn4Q8VCH8 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ubxn4Q8VCH8 Gm25016-201ENSMUST00000158399 131 ntBASIC17.22■□□□□ 0.35
Ubxn4Q8VCH8 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC17.22■□□□□ 0.35
Ubxn4Q8VCH8 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ubxn4Q8VCH8 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Ubxn4Q8VCH8 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ubxn4Q8VCH8 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Ubxn4Q8VCH8 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ubxn4Q8VCH8 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ubxn4Q8VCH8 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Ubxn4Q8VCH8 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC17.21■□□□□ 0.35
Ubxn4Q8VCH8 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ubxn4Q8VCH8 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ubxn4Q8VCH8 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Ubxn4Q8VCH8 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ubxn4Q8VCH8 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC17.21■□□□□ 0.35
Ubxn4Q8VCH8 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ubxn4Q8VCH8 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Ubxn4Q8VCH8 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ubxn4Q8VCH8 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ubxn4Q8VCH8 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ubxn4Q8VCH8 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ubxn4Q8VCH8 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Ubxn4Q8VCH8 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC17.21■□□□□ 0.35
Ubxn4Q8VCH8 Mir3081-201ENSMUST00000175305 84 ntBASIC17.21■□□□□ 0.35
Ubxn4Q8VCH8 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Ubxn4Q8VCH8 AC158538.2-201ENSMUST00000225455 906 ntBASIC17.21■□□□□ 0.35
Ubxn4Q8VCH8 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Ubxn4Q8VCH8 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC17.21■□□□□ 0.35
Ubxn4Q8VCH8 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Ubxn4Q8VCH8 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Ubxn4Q8VCH8 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC17.21■□□□□ 0.35
Ubxn4Q8VCH8 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Ubxn4Q8VCH8 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
Ubxn4Q8VCH8 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Ubxn4Q8VCH8 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Ubxn4Q8VCH8 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ubxn4Q8VCH8 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ubxn4Q8VCH8 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ubxn4Q8VCH8 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ubxn4Q8VCH8 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC17.2■□□□□ 0.34
Ubxn4Q8VCH8 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ubxn4Q8VCH8 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ubxn4Q8VCH8 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ubxn4Q8VCH8 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ubxn4Q8VCH8 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
Ubxn4Q8VCH8 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC17.2■□□□□ 0.34
Ubxn4Q8VCH8 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Ubxn4Q8VCH8 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Ubxn4Q8VCH8 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ubxn4Q8VCH8 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC17.2■□□□□ 0.34
Ubxn4Q8VCH8 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Ubxn4Q8VCH8 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC17.2■□□□□ 0.34
Ubxn4Q8VCH8 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ubxn4Q8VCH8 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ubxn4Q8VCH8 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ubxn4Q8VCH8 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ubxn4Q8VCH8 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ubxn4Q8VCH8 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Ubxn4Q8VCH8 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ubxn4Q8VCH8 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ubxn4Q8VCH8 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ubxn4Q8VCH8 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Ubxn4Q8VCH8 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ubxn4Q8VCH8 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
Ubxn4Q8VCH8 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Ubxn4Q8VCH8 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ubxn4Q8VCH8 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Ubxn4Q8VCH8 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ubxn4Q8VCH8 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ubxn4Q8VCH8 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Ubxn4Q8VCH8 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Ubxn4Q8VCH8 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Ubxn4Q8VCH8 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ubxn4Q8VCH8 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC17.19■□□□□ 0.34
Ubxn4Q8VCH8 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ubxn4Q8VCH8 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Ubxn4Q8VCH8 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ubxn4Q8VCH8 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC17.19■□□□□ 0.34
Ubxn4Q8VCH8 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Ubxn4Q8VCH8 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
Ubxn4Q8VCH8 Gm29518-201ENSMUST00000190858 372 ntBASIC17.19■□□□□ 0.34
Ubxn4Q8VCH8 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC17.19■□□□□ 0.34
Ubxn4Q8VCH8 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC17.19■□□□□ 0.34
Ubxn4Q8VCH8 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Ubxn4Q8VCH8 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC17.19■□□□□ 0.34
Ubxn4Q8VCH8 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ubxn4Q8VCH8 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ubxn4Q8VCH8 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ubxn4Q8VCH8 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Ubxn4Q8VCH8 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
Ubxn4Q8VCH8 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ubxn4Q8VCH8 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms