Protein–RNA interactions for Protein: Q8VCE1

Dnajc28, DnaJ homolog subfamily C member 28, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dnajc28Q8VCE1 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Dnajc28Q8VCE1 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Dnajc28Q8VCE1 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Dnajc28Q8VCE1 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Dnajc28Q8VCE1 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Dnajc28Q8VCE1 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Dnajc28Q8VCE1 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Dnajc28Q8VCE1 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Dnajc28Q8VCE1 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Dnajc28Q8VCE1 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Dnajc28Q8VCE1 Gm13294-201ENSMUST00000121757 1330 ntBASIC16.53■□□□□ 0.24
Dnajc28Q8VCE1 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Dnajc28Q8VCE1 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Dnajc28Q8VCE1 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Dnajc28Q8VCE1 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
Dnajc28Q8VCE1 Gm5177-201ENSMUST00000183092 997 ntBASIC16.53■□□□□ 0.24
Dnajc28Q8VCE1 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Dnajc28Q8VCE1 Gm7063-201ENSMUST00000186840 981 ntBASIC16.53■□□□□ 0.24
Dnajc28Q8VCE1 AC127302.2-201ENSMUST00000215212 268 ntBASIC16.53■□□□□ 0.24
Dnajc28Q8VCE1 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC16.53■□□□□ 0.24
Dnajc28Q8VCE1 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC16.53■□□□□ 0.24
Dnajc28Q8VCE1 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Dnajc28Q8VCE1 Gm8396-201ENSMUST00000057361 823 ntBASIC16.53■□□□□ 0.24
Dnajc28Q8VCE1 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Dnajc28Q8VCE1 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Dnajc28Q8VCE1 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Dnajc28Q8VCE1 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Dnajc28Q8VCE1 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Dnajc28Q8VCE1 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Dnajc28Q8VCE1 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Dnajc28Q8VCE1 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Dnajc28Q8VCE1 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Dnajc28Q8VCE1 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Dnajc28Q8VCE1 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Dnajc28Q8VCE1 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Dnajc28Q8VCE1 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
Dnajc28Q8VCE1 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Dnajc28Q8VCE1 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Dnajc28Q8VCE1 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Dnajc28Q8VCE1 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Dnajc28Q8VCE1 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Dnajc28Q8VCE1 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Dnajc28Q8VCE1 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Dnajc28Q8VCE1 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Dnajc28Q8VCE1 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Dnajc28Q8VCE1 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Dnajc28Q8VCE1 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
Dnajc28Q8VCE1 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC16.52■□□□□ 0.24
Dnajc28Q8VCE1 Gm27301-201ENSMUST00000184012 127 ntBASIC16.52■□□□□ 0.24
Dnajc28Q8VCE1 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC16.52■□□□□ 0.24
Dnajc28Q8VCE1 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC16.52■□□□□ 0.24
Dnajc28Q8VCE1 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Dnajc28Q8VCE1 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC16.52■□□□□ 0.23
Dnajc28Q8VCE1 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Dnajc28Q8VCE1 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Dnajc28Q8VCE1 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Dnajc28Q8VCE1 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC16.52■□□□□ 0.23
Dnajc28Q8VCE1 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Dnajc28Q8VCE1 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Dnajc28Q8VCE1 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Dnajc28Q8VCE1 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Dnajc28Q8VCE1 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Dnajc28Q8VCE1 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC16.51■□□□□ 0.23
Dnajc28Q8VCE1 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Dnajc28Q8VCE1 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Dnajc28Q8VCE1 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Dnajc28Q8VCE1 Gm12892-201ENSMUST00000117367 1146 ntBASIC16.51■□□□□ 0.23
Dnajc28Q8VCE1 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Dnajc28Q8VCE1 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Dnajc28Q8VCE1 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC16.51■□□□□ 0.23
Dnajc28Q8VCE1 Gm18246-201ENSMUST00000221023 728 ntBASIC16.51■□□□□ 0.23
Dnajc28Q8VCE1 AC139382.1-201ENSMUST00000221402 498 ntBASIC16.51■□□□□ 0.23
Dnajc28Q8VCE1 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Dnajc28Q8VCE1 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Dnajc28Q8VCE1 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Dnajc28Q8VCE1 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Dnajc28Q8VCE1 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC16.51■□□□□ 0.23
Dnajc28Q8VCE1 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Dnajc28Q8VCE1 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Dnajc28Q8VCE1 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Dnajc28Q8VCE1 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Dnajc28Q8VCE1 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Dnajc28Q8VCE1 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Dnajc28Q8VCE1 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Dnajc28Q8VCE1 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Dnajc28Q8VCE1 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
Dnajc28Q8VCE1 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Dnajc28Q8VCE1 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Dnajc28Q8VCE1 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Dnajc28Q8VCE1 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Dnajc28Q8VCE1 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Dnajc28Q8VCE1 Gm15427-201ENSMUST00000117288 531 ntBASIC16.5■□□□□ 0.23
Dnajc28Q8VCE1 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC16.5■□□□□ 0.23
Dnajc28Q8VCE1 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC16.5■□□□□ 0.23
Dnajc28Q8VCE1 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
Dnajc28Q8VCE1 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Dnajc28Q8VCE1 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Dnajc28Q8VCE1 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Dnajc28Q8VCE1 Gm45133-201ENSMUST00000207548 2773 ntBASIC16.5■□□□□ 0.23
Dnajc28Q8VCE1 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms