Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Ndc1Q8VCB1 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ndc1Q8VCB1 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ndc1Q8VCB1 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ndc1Q8VCB1 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ndc1Q8VCB1 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ndc1Q8VCB1 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC14.31□□□□□ -0.12
Ndc1Q8VCB1 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ndc1Q8VCB1 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ndc1Q8VCB1 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Ndc1Q8VCB1 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ndc1Q8VCB1 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ndc1Q8VCB1 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ndc1Q8VCB1 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ndc1Q8VCB1 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ndc1Q8VCB1 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ndc1Q8VCB1 App-207ENSMUST00000227737 2827 ntBASIC14.3□□□□□ -0.12
Ndc1Q8VCB1 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ndc1Q8VCB1 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ndc1Q8VCB1 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC14.3□□□□□ -0.12
Ndc1Q8VCB1 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ndc1Q8VCB1 Gm11453-201ENSMUST00000117318 1007 ntBASIC14.3□□□□□ -0.12
Ndc1Q8VCB1 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Ndc1Q8VCB1 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ndc1Q8VCB1 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC14.3□□□□□ -0.12
Ndc1Q8VCB1 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC14.3□□□□□ -0.12
Ndc1Q8VCB1 Gm44492-201ENSMUST00000197012 141 ntBASIC14.3□□□□□ -0.12
Ndc1Q8VCB1 AC151286.1-201ENSMUST00000198489 145 ntBASIC14.3□□□□□ -0.12
Ndc1Q8VCB1 AC154572.2-201ENSMUST00000225105 997 ntBASIC14.3□□□□□ -0.12
Ndc1Q8VCB1 Gm15500-202ENSMUST00000071641 1019 ntBASIC14.3□□□□□ -0.12
Ndc1Q8VCB1 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ndc1Q8VCB1 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ndc1Q8VCB1 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ndc1Q8VCB1 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ndc1Q8VCB1 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ndc1Q8VCB1 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC14.3□□□□□ -0.12
Ndc1Q8VCB1 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Ndc1Q8VCB1 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ndc1Q8VCB1 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ndc1Q8VCB1 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ndc1Q8VCB1 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC14.3□□□□□ -0.12
Ndc1Q8VCB1 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ndc1Q8VCB1 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ndc1Q8VCB1 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ndc1Q8VCB1 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ndc1Q8VCB1 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ndc1Q8VCB1 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC14.3□□□□□ -0.12
Ndc1Q8VCB1 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ndc1Q8VCB1 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ndc1Q8VCB1 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ndc1Q8VCB1 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ndc1Q8VCB1 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
Ndc1Q8VCB1 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ndc1Q8VCB1 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ndc1Q8VCB1 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ndc1Q8VCB1 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC14.29□□□□□ -0.12
Ndc1Q8VCB1 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC14.29□□□□□ -0.12
Ndc1Q8VCB1 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ndc1Q8VCB1 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ndc1Q8VCB1 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC14.29□□□□□ -0.12
Ndc1Q8VCB1 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
Ndc1Q8VCB1 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Ndc1Q8VCB1 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
Ndc1Q8VCB1 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ndc1Q8VCB1 Gm17968-201ENSMUST00000194902 784 ntBASIC14.29□□□□□ -0.12
Ndc1Q8VCB1 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
Ndc1Q8VCB1 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
Ndc1Q8VCB1 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC14.29□□□□□ -0.12
Ndc1Q8VCB1 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ndc1Q8VCB1 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC14.29□□□□□ -0.12
Ndc1Q8VCB1 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ndc1Q8VCB1 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ndc1Q8VCB1 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Ndc1Q8VCB1 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ndc1Q8VCB1 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ndc1Q8VCB1 Gm13294-201ENSMUST00000121757 1330 ntBASIC14.29□□□□□ -0.12
Ndc1Q8VCB1 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ndc1Q8VCB1 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Ndc1Q8VCB1 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ndc1Q8VCB1 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ndc1Q8VCB1 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ndc1Q8VCB1 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ndc1Q8VCB1 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ndc1Q8VCB1 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ndc1Q8VCB1 Gm13337-201ENSMUST00000119183 1594 ntBASIC14.29□□□□□ -0.12
Ndc1Q8VCB1 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ndc1Q8VCB1 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ndc1Q8VCB1 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ndc1Q8VCB1 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ndc1Q8VCB1 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ndc1Q8VCB1 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ndc1Q8VCB1 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ndc1Q8VCB1 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Ndc1Q8VCB1 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Ndc1Q8VCB1 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ndc1Q8VCB1 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ndc1Q8VCB1 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ndc1Q8VCB1 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ndc1Q8VCB1 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ndc1Q8VCB1 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms