Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC12.37□□□□□ -0.43
Nup35Q8R4R6 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Nup35Q8R4R6 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Nup35Q8R4R6 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC12.37□□□□□ -0.43
Nup35Q8R4R6 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC12.37□□□□□ -0.43
Nup35Q8R4R6 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Nup35Q8R4R6 Gm7286-201ENSMUST00000182691 1007 ntBASIC12.37□□□□□ -0.43
Nup35Q8R4R6 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC12.37□□□□□ -0.43
Nup35Q8R4R6 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nup35Q8R4R6 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nup35Q8R4R6 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nup35Q8R4R6 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nup35Q8R4R6 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC12.37□□□□□ -0.43
Nup35Q8R4R6 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nup35Q8R4R6 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nup35Q8R4R6 Gm43205-201ENSMUST00000198622 1968 ntBASIC12.37□□□□□ -0.43
Nup35Q8R4R6 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Nup35Q8R4R6 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nup35Q8R4R6 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nup35Q8R4R6 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
Nup35Q8R4R6 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nup35Q8R4R6 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC12.37□□□□□ -0.43
Nup35Q8R4R6 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nup35Q8R4R6 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Nup35Q8R4R6 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Nup35Q8R4R6 AC162938.1-201ENSMUST00000213140 2323 ntBASIC12.37□□□□□ -0.43
Nup35Q8R4R6 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nup35Q8R4R6 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nup35Q8R4R6 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Nup35Q8R4R6 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nup35Q8R4R6 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Nup35Q8R4R6 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nup35Q8R4R6 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Nup35Q8R4R6 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nup35Q8R4R6 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nup35Q8R4R6 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nup35Q8R4R6 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Nup35Q8R4R6 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nup35Q8R4R6 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Nup35Q8R4R6 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Nup35Q8R4R6 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Nup35Q8R4R6 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Nup35Q8R4R6 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Nup35Q8R4R6 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nup35Q8R4R6 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Nup35Q8R4R6 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC12.36□□□□□ -0.43
Nup35Q8R4R6 Gm13312-201ENSMUST00000119631 718 ntBASIC12.36□□□□□ -0.43
Nup35Q8R4R6 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Nup35Q8R4R6 Gm9013-201ENSMUST00000132939 882 ntBASIC12.36□□□□□ -0.43
Nup35Q8R4R6 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Nup35Q8R4R6 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC12.36□□□□□ -0.43
Nup35Q8R4R6 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC12.36□□□□□ -0.43
Nup35Q8R4R6 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nup35Q8R4R6 Gm9172-201ENSMUST00000212092 954 ntBASIC12.36□□□□□ -0.43
Nup35Q8R4R6 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nup35Q8R4R6 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nup35Q8R4R6 Gm9856-201ENSMUST00000217077 2578 ntBASIC12.36□□□□□ -0.43
Nup35Q8R4R6 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nup35Q8R4R6 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Nup35Q8R4R6 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nup35Q8R4R6 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nup35Q8R4R6 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nup35Q8R4R6 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nup35Q8R4R6 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC12.36□□□□□ -0.43
Nup35Q8R4R6 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Nup35Q8R4R6 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Nup35Q8R4R6 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Nup35Q8R4R6 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nup35Q8R4R6 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Nup35Q8R4R6 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nup35Q8R4R6 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nup35Q8R4R6 Nupl1-207ENSMUST00000225311 2475 ntBASIC12.35□□□□□ -0.43
Nup35Q8R4R6 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nup35Q8R4R6 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nup35Q8R4R6 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nup35Q8R4R6 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Nup35Q8R4R6 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nup35Q8R4R6 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC12.35□□□□□ -0.43
Nup35Q8R4R6 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Nup35Q8R4R6 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nup35Q8R4R6 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC12.35□□□□□ -0.43
Nup35Q8R4R6 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Nup35Q8R4R6 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Nup35Q8R4R6 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Nup35Q8R4R6 Gm23547-201ENSMUST00000158210 271 ntBASIC12.35□□□□□ -0.43
Nup35Q8R4R6 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC12.35□□□□□ -0.43
Nup35Q8R4R6 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC12.35□□□□□ -0.43
Nup35Q8R4R6 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC12.35□□□□□ -0.43
Nup35Q8R4R6 Gm18032-201ENSMUST00000222541 538 ntBASIC12.35□□□□□ -0.43
Nup35Q8R4R6 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Nup35Q8R4R6 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Nup35Q8R4R6 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Nup35Q8R4R6 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Nup35Q8R4R6 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC12.35□□□□□ -0.43
Nup35Q8R4R6 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Nup35Q8R4R6 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Nup35Q8R4R6 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nup35Q8R4R6 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nup35Q8R4R6 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nup35Q8R4R6 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms