Protein–RNA interactions for Protein: Q8R1N4

Nudcd3, NudC domain-containing protein 3, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd3Q8R1N4 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC15.16■□□□□ 0.02
Nudcd3Q8R1N4 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nudcd3Q8R1N4 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nudcd3Q8R1N4 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nudcd3Q8R1N4 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nudcd3Q8R1N4 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Nudcd3Q8R1N4 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC15.16■□□□□ 0.02
Nudcd3Q8R1N4 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Nudcd3Q8R1N4 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Nudcd3Q8R1N4 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
Nudcd3Q8R1N4 Gm6433-201ENSMUST00000118634 875 ntBASIC15.16■□□□□ 0.02
Nudcd3Q8R1N4 AC153881.2-201ENSMUST00000214877 204 ntBASIC15.16■□□□□ 0.02
Nudcd3Q8R1N4 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Nudcd3Q8R1N4 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nudcd3Q8R1N4 Gm38318-201ENSMUST00000195769 1706 ntBASIC15.16■□□□□ 0.02
Nudcd3Q8R1N4 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Nudcd3Q8R1N4 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nudcd3Q8R1N4 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nudcd3Q8R1N4 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC15.16■□□□□ 0.02
Nudcd3Q8R1N4 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nudcd3Q8R1N4 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nudcd3Q8R1N4 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nudcd3Q8R1N4 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Nudcd3Q8R1N4 Gm43697-201ENSMUST00000199637 2581 ntBASIC15.16■□□□□ 0.02
Nudcd3Q8R1N4 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nudcd3Q8R1N4 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Nudcd3Q8R1N4 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nudcd3Q8R1N4 Gm37297-201ENSMUST00000192974 2384 ntBASIC15.16■□□□□ 0.02
Nudcd3Q8R1N4 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
Nudcd3Q8R1N4 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nudcd3Q8R1N4 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nudcd3Q8R1N4 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nudcd3Q8R1N4 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC15.15■□□□□ 0.02
Nudcd3Q8R1N4 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Nudcd3Q8R1N4 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nudcd3Q8R1N4 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nudcd3Q8R1N4 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Nudcd3Q8R1N4 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nudcd3Q8R1N4 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nudcd3Q8R1N4 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nudcd3Q8R1N4 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Nudcd3Q8R1N4 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Nudcd3Q8R1N4 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Nudcd3Q8R1N4 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nudcd3Q8R1N4 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC15.15■□□□□ 0.02
Nudcd3Q8R1N4 AC159093.1-201ENSMUST00000227779 380 ntBASIC15.15■□□□□ 0.02
Nudcd3Q8R1N4 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nudcd3Q8R1N4 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
Nudcd3Q8R1N4 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nudcd3Q8R1N4 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Nudcd3Q8R1N4 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Nudcd3Q8R1N4 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nudcd3Q8R1N4 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nudcd3Q8R1N4 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nudcd3Q8R1N4 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nudcd3Q8R1N4 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Nudcd3Q8R1N4 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nudcd3Q8R1N4 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC15.14■□□□□ 0.01
Nudcd3Q8R1N4 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nudcd3Q8R1N4 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Nudcd3Q8R1N4 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nudcd3Q8R1N4 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nudcd3Q8R1N4 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nudcd3Q8R1N4 Sorbs3-204ENSMUST00000227929 2460 ntBASIC15.14■□□□□ 0.01
Nudcd3Q8R1N4 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Nudcd3Q8R1N4 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nudcd3Q8R1N4 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Nudcd3Q8R1N4 Gm13312-201ENSMUST00000119631 718 ntBASIC15.14■□□□□ 0.01
Nudcd3Q8R1N4 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Nudcd3Q8R1N4 Gm7556-201ENSMUST00000201178 1084 ntBASIC15.14■□□□□ 0.01
Nudcd3Q8R1N4 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
Nudcd3Q8R1N4 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nudcd3Q8R1N4 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nudcd3Q8R1N4 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nudcd3Q8R1N4 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nudcd3Q8R1N4 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC15.14■□□□□ 0.01
Nudcd3Q8R1N4 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Nudcd3Q8R1N4 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
Nudcd3Q8R1N4 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nudcd3Q8R1N4 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC15.14■□□□□ 0.01
Nudcd3Q8R1N4 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nudcd3Q8R1N4 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nudcd3Q8R1N4 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Nudcd3Q8R1N4 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Nudcd3Q8R1N4 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Nudcd3Q8R1N4 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC15.14■□□□□ 0.01
Nudcd3Q8R1N4 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Nudcd3Q8R1N4 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC15.14■□□□□ 0.01
Nudcd3Q8R1N4 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nudcd3Q8R1N4 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Nudcd3Q8R1N4 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nudcd3Q8R1N4 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nudcd3Q8R1N4 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Nudcd3Q8R1N4 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
Nudcd3Q8R1N4 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC15.13■□□□□ 0.01
Nudcd3Q8R1N4 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Nudcd3Q8R1N4 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC15.13■□□□□ 0.01
Nudcd3Q8R1N4 Gm5587-201ENSMUST00000206270 674 ntBASIC15.13■□□□□ 0.01
Nudcd3Q8R1N4 Gm19164-201ENSMUST00000210667 640 ntBASIC15.13■□□□□ 0.01
Nudcd3Q8R1N4 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC15.13■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms