Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Sf3a1Q8K4Z5 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC18.53■□□□□ 0.56
Sf3a1Q8K4Z5 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sf3a1Q8K4Z5 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sf3a1Q8K4Z5 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Sf3a1Q8K4Z5 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sf3a1Q8K4Z5 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sf3a1Q8K4Z5 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sf3a1Q8K4Z5 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Sf3a1Q8K4Z5 Gm5049-201ENSMUST00000195878 1590 ntBASIC18.52■□□□□ 0.56
Sf3a1Q8K4Z5 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sf3a1Q8K4Z5 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Sf3a1Q8K4Z5 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Sf3a1Q8K4Z5 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Sf3a1Q8K4Z5 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC18.52■□□□□ 0.56
Sf3a1Q8K4Z5 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sf3a1Q8K4Z5 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Sf3a1Q8K4Z5 Gm43514-201ENSMUST00000198852 424 ntBASIC18.52■□□□□ 0.56
Sf3a1Q8K4Z5 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sf3a1Q8K4Z5 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sf3a1Q8K4Z5 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sf3a1Q8K4Z5 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sf3a1Q8K4Z5 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Sf3a1Q8K4Z5 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Sf3a1Q8K4Z5 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sf3a1Q8K4Z5 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Sf3a1Q8K4Z5 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Sf3a1Q8K4Z5 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
Sf3a1Q8K4Z5 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC18.52■□□□□ 0.55
Sf3a1Q8K4Z5 Gm11839-201ENSMUST00000120647 1953 ntBASIC18.51■□□□□ 0.55
Sf3a1Q8K4Z5 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC18.51■□□□□ 0.55
Sf3a1Q8K4Z5 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC18.51■□□□□ 0.55
Sf3a1Q8K4Z5 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sf3a1Q8K4Z5 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sf3a1Q8K4Z5 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Sf3a1Q8K4Z5 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Sf3a1Q8K4Z5 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Sf3a1Q8K4Z5 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Sf3a1Q8K4Z5 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sf3a1Q8K4Z5 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sf3a1Q8K4Z5 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sf3a1Q8K4Z5 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sf3a1Q8K4Z5 Gm9727-201ENSMUST00000161387 555 ntBASIC18.51■□□□□ 0.55
Sf3a1Q8K4Z5 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Sf3a1Q8K4Z5 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
Sf3a1Q8K4Z5 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Sf3a1Q8K4Z5 BC037039-201ENSMUST00000192003 2205 ntBASIC18.51■□□□□ 0.55
Sf3a1Q8K4Z5 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sf3a1Q8K4Z5 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Sf3a1Q8K4Z5 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sf3a1Q8K4Z5 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sf3a1Q8K4Z5 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sf3a1Q8K4Z5 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Sf3a1Q8K4Z5 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Sf3a1Q8K4Z5 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Sf3a1Q8K4Z5 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Sf3a1Q8K4Z5 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sf3a1Q8K4Z5 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sf3a1Q8K4Z5 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sf3a1Q8K4Z5 Tfap2a-203ENSMUST00000223869 2037 ntBASIC18.5■□□□□ 0.55
Sf3a1Q8K4Z5 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC18.5■□□□□ 0.55
Sf3a1Q8K4Z5 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sf3a1Q8K4Z5 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sf3a1Q8K4Z5 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sf3a1Q8K4Z5 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC18.5■□□□□ 0.55
Sf3a1Q8K4Z5 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
Sf3a1Q8K4Z5 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sf3a1Q8K4Z5 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sf3a1Q8K4Z5 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
Sf3a1Q8K4Z5 Gm13597-201ENSMUST00000121239 375 ntBASIC18.5■□□□□ 0.55
Sf3a1Q8K4Z5 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC18.5■□□□□ 0.55
Sf3a1Q8K4Z5 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Sf3a1Q8K4Z5 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Sf3a1Q8K4Z5 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sf3a1Q8K4Z5 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sf3a1Q8K4Z5 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC18.5■□□□□ 0.55
Sf3a1Q8K4Z5 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Sf3a1Q8K4Z5 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sf3a1Q8K4Z5 AC131586.3-201ENSMUST00000228355 1367 ntBASIC18.5■□□□□ 0.55
Sf3a1Q8K4Z5 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sf3a1Q8K4Z5 Gm29361-201ENSMUST00000183323 2000 ntBASIC18.5■□□□□ 0.55
Sf3a1Q8K4Z5 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sf3a1Q8K4Z5 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Sf3a1Q8K4Z5 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sf3a1Q8K4Z5 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sf3a1Q8K4Z5 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
Sf3a1Q8K4Z5 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Sf3a1Q8K4Z5 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Sf3a1Q8K4Z5 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sf3a1Q8K4Z5 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sf3a1Q8K4Z5 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sf3a1Q8K4Z5 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sf3a1Q8K4Z5 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sf3a1Q8K4Z5 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sf3a1Q8K4Z5 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Sf3a1Q8K4Z5 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Sf3a1Q8K4Z5 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sf3a1Q8K4Z5 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sf3a1Q8K4Z5 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Sf3a1Q8K4Z5 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms