Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC14.31□□□□□ -0.12
Clrn1Q8K445 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC14.31□□□□□ -0.12
Clrn1Q8K445 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Clrn1Q8K445 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Clrn1Q8K445 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Clrn1Q8K445 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Clrn1Q8K445 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Clrn1Q8K445 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Clrn1Q8K445 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Clrn1Q8K445 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Clrn1Q8K445 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Clrn1Q8K445 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Clrn1Q8K445 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Clrn1Q8K445 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Clrn1Q8K445 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Clrn1Q8K445 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Clrn1Q8K445 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Clrn1Q8K445 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Clrn1Q8K445 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Clrn1Q8K445 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC14.31□□□□□ -0.12
Clrn1Q8K445 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Clrn1Q8K445 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC14.3□□□□□ -0.12
Clrn1Q8K445 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Clrn1Q8K445 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Clrn1Q8K445 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Clrn1Q8K445 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Clrn1Q8K445 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Clrn1Q8K445 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC14.3□□□□□ -0.12
Clrn1Q8K445 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Clrn1Q8K445 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Clrn1Q8K445 Gm2651-201ENSMUST00000203560 838 ntBASIC14.3□□□□□ -0.12
Clrn1Q8K445 Gm9449-201ENSMUST00000207265 1011 ntBASIC14.3□□□□□ -0.12
Clrn1Q8K445 Gm45167-201ENSMUST00000208007 322 ntBASIC14.3□□□□□ -0.12
Clrn1Q8K445 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Clrn1Q8K445 Gm15590-201ENSMUST00000078419 552 ntBASIC14.3□□□□□ -0.12
Clrn1Q8K445 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Clrn1Q8K445 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Clrn1Q8K445 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Clrn1Q8K445 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Clrn1Q8K445 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC14.3□□□□□ -0.12
Clrn1Q8K445 Gm38058-201ENSMUST00000194323 4368 ntBASIC14.3□□□□□ -0.12
Clrn1Q8K445 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Clrn1Q8K445 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Clrn1Q8K445 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Clrn1Q8K445 Gm7901-201ENSMUST00000120430 1597 ntBASIC14.3□□□□□ -0.12
Clrn1Q8K445 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Clrn1Q8K445 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC14.3□□□□□ -0.12
Clrn1Q8K445 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Clrn1Q8K445 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Clrn1Q8K445 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Clrn1Q8K445 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Clrn1Q8K445 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Clrn1Q8K445 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Clrn1Q8K445 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Clrn1Q8K445 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Clrn1Q8K445 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Clrn1Q8K445 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Clrn1Q8K445 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Clrn1Q8K445 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Clrn1Q8K445 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC14.29□□□□□ -0.12
Clrn1Q8K445 AC133598.3-202ENSMUST00000224219 531 ntBASIC14.29□□□□□ -0.12
Clrn1Q8K445 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC14.29□□□□□ -0.12
Clrn1Q8K445 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC14.29□□□□□ -0.12
Clrn1Q8K445 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Clrn1Q8K445 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Clrn1Q8K445 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Clrn1Q8K445 Gm5049-201ENSMUST00000195878 1590 ntBASIC14.29□□□□□ -0.12
Clrn1Q8K445 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Clrn1Q8K445 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Clrn1Q8K445 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Clrn1Q8K445 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Clrn1Q8K445 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Clrn1Q8K445 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Clrn1Q8K445 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Clrn1Q8K445 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Clrn1Q8K445 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Clrn1Q8K445 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Clrn1Q8K445 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Clrn1Q8K445 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Clrn1Q8K445 Gm13036-201ENSMUST00000117799 748 ntBASIC14.28□□□□□ -0.12
Clrn1Q8K445 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Clrn1Q8K445 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Clrn1Q8K445 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC14.28□□□□□ -0.12
Clrn1Q8K445 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Clrn1Q8K445 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Clrn1Q8K445 Mir5126-201ENSMUST00000175513 77 ntBASIC14.28□□□□□ -0.12
Clrn1Q8K445 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Clrn1Q8K445 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC14.28□□□□□ -0.12
Clrn1Q8K445 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Clrn1Q8K445 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Clrn1Q8K445 AC138767.1-201ENSMUST00000222661 415 ntBASIC14.28□□□□□ -0.12
Clrn1Q8K445 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Clrn1Q8K445 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Clrn1Q8K445 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Clrn1Q8K445 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Clrn1Q8K445 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Clrn1Q8K445 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Clrn1Q8K445 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Clrn1Q8K445 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Clrn1Q8K445 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms